Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
AASDH_chr4_56333290_56392491	0/0	g0318	1	0	0	1	0	0	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	0/0	g0319	1	0	0	0	0	1	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	0/0	g0320	1	0	0	1	0	0	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	0/0	g0321	1	0	1	0	0	0	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	0/0	g0322	1	1	0	0	0	0	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	0/0	g0323	1	0	0	1	0	0	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	0/0	g0324	1	0	0	1	0	0	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	0/0	g0325	1	0	0	1	0	0	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	0/0	g0326	1	1	0	0	0	0	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	0/0	g0327	1	0	1	0	0	0	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	0/0	g0328	1	0	1	0	0	0	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	0/0	g0329	1	1	0	0	0	0	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	0/0	g0330	1	1	0	0	0	0	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	0/0	g0331	1	1	0	0	0	0	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	0/0	g0001	13	0	3	5	3	2	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	0/0	g0002	7	7	0	0	0	0	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	0/0	g0003	6	1	1	4	0	0	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	0/0	g0004	4	4	0	0	0	0	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	0/0	g0005	3	3	0	0	0	0	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	0/0	g0006	3	0	2	1	0	0	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	0/0	g0007	3	0	0	3	0	0	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	0/0	g0008	3	0	0	3	0	0	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	0/0	g0009	3	0	0	3	0	0	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	0/0	g0010	3	0	1	2	0	0	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	0/0	g0011	2	2	0	0	0	0	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	0/0	g0012	2	2	0	0	0	0	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	0/0	g0013	2	0	0	2	0	0	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	0/0	g0014	2	0	0	2	0	0	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	0/0	g0015	2	0	0	2	0	0	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	0/0	g0016	2	0	0	2	0	0	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	0/0	g0017	2	0	0	1	1	0	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	0/0	g0018	2	0	2	0	0	0	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	0/0	g0019	2	2	0	0	0	0	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	0/0	g0020	2	0	0	2	0	0	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	0/0	g0021	2	0	0	2	0	0	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	0/0	g0022	2	0	0	2	0	0	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	0/0	g0023	2	0	0	2	0	0	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	0/0	g0024	2	0	2	0	0	0	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	0/0	g0025	2	0	0	2	0	0	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	0/0	g0026	2	0	2	0	0	0	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	0/0	g0027	2	0	0	2	0	0	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	0/0	g0028	2	0	0	1	0	1	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	0/0	g0029	2	0	0	2	0	0	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	0/0	g0030	2	2	0	0	0	0	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	0/0	g0031	2	0	2	0	0	0	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	0/0	g0032	2	0	1	1	0	0	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	0/0	g0033	2	0	1	0	0	1	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	0/0	g0034	2	0	1	1	0	0	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	0/0	g0035	2	1	1	0	0	0	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	0/0	g0036	1	1	0	0	0	0	AASS	chr7	122068549	122149249