JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
CES3_chr16_66956266_66980149	0/0	g0033	1	0	0	0	0	1	CES3	chr16	66956266	66980149
CES3_chr16_66956266_66980149	0/0	g0034	1	0	1	0	0	0	CES3	chr16	66956266	66980149
CES3_chr16_66956266_66980149	0/0	g0035	1	0	0	1	0	0	CES3	chr16	66956266	66980149
CES3_chr16_66956266_66980149	0/0	g0036	1	0	1	0	0	0	CES3	chr16	66956266	66980149
CES3_chr16_66956266_66980149	0/0	g0037	1	0	0	1	0	0	CES3	chr16	66956266	66980149
CES3_chr16_66956266_66980149	0/0	g0038	1	0	0	1	0	0	CES3	chr16	66956266	66980149
CES3_chr16_66956266_66980149	0/0	g0039	1	0	0	0	0	1	CES3	chr16	66956266	66980149
CES3_chr16_66956266_66980149	0/0	g0040	1	0	0	1	0	0	CES3	chr16	66956266	66980149
CES3_chr16_66956266_66980149	0/0	g0041	1	0	0	0	1	0	CES3	chr16	66956266	66980149
CES3_chr16_66956266_66980149	0/0	g0042	1	0	1	0	0	0	CES3	chr16	66956266	66980149
CES3_chr16_66956266_66980149	0/0	g0043	1	0	0	1	0	0	CES3	chr16	66956266	66980149
CES3_chr16_66956266_66980149	0/0	g0044	1	0	0	1	0	0	CES3	chr16	66956266	66980149
CES3_chr16_66956266_66980149	0/0	g0045	1	0	0	1	0	0	CES3	chr16	66956266	66980149
CES3_chr16_66956266_66980149	0/0	g0046	1	0	0	0	0	1	CES3	chr16	66956266	66980149
CES3_chr16_66956266_66980149	0/0	g0047	1	0	0	1	0	0	CES3	chr16	66956266	66980149
CES3_chr16_66956266_66980149	0/0	g0048	1	0	1	0	0	0	CES3	chr16	66956266	66980149
CES3_chr16_66956266_66980149	0/0	g0049	1	0	0	1	0	0	CES3	chr16	66956266	66980149
CES3_chr16_66956266_66980149	0/0	g0050	1	0	0	1	0	0	CES3	chr16	66956266	66980149
CES3_chr16_66956266_66980149	0/0	g0051	1	1	0	0	0	0	CES3	chr16	66956266	66980149
CES3_chr16_66956266_66980149	0/0	g0052	1	0	0	1	0	0	CES3	chr16	66956266	66980149
CES3_chr16_66956266_66980149	0/0	g0053	1	0	1	0	0	0	CES3	chr16	66956266	66980149
CES3_chr16_66956266_66980149	0/0	g0054	1	0	0	0	0	1	CES3	chr16	66956266	66980149
CES3_chr16_66956266_66980149	0/0	g0055	1	0	0	1	0	0	CES3	chr16	66956266	66980149
CES3_chr16_66956266_66980149	0/0	g0056	1	0	0	1	0	0	CES3	chr16	66956266	66980149
CES3_chr16_66956266_66980149	0/0	g0057	1	0	0	1	0	0	CES3	chr16	66956266	66980149
CES3_chr16_66956266_66980149	0/0	g0058	1	1	0	0	0	0	CES3	chr16	66956266	66980149
CES3_chr16_66956266_66980149	0/0	g0059	1	0	1	0	0	0	CES3	chr16	66956266	66980149
CES3_chr16_66956266_66980149	0/0	g0060	1	1	0	0	0	0	CES3	chr16	66956266	66980149
CES3_chr16_66956266_66980149	0/0	g0061	1	1	0	0	0	0	CES3	chr16	66956266	66980149
CES3_chr16_66956266_66980149	0/0	g0062	1	1	0	0	0	0	CES3	chr16	66956266	66980149
CES3_chr16_66956266_66980149	0/0	g0063	1	0	0	1	0	0	CES3	chr16	66956266	66980149
CES3_chr16_66956266_66980149	0/0	g0064	1	0	0	1	0	0	CES3	chr16	66956266	66980149
CES3_chr16_66956266_66980149	0/0	g0065	1	0	0	0	0	1	CES3	chr16	66956266	66980149
CES3_chr16_66956266_66980149	0/0	g0066	1	0	1	0	0	0	CES3	chr16	66956266	66980149
CES3_chr16_66956266_66980149	0/0	g0067	1	0	0	1	0	0	CES3	chr16	66956266	66980149
CES3_chr16_66956266_66980149	0/0	g0068	1	1	0	0	0	0	CES3	chr16	66956266	66980149
CES3_chr16_66956266_66980149	0/0	g0069	1	1	0	0	0	0	CES3	chr16	66956266	66980149
CES4A_chr16_66983589_67015417	0/0	g0001	22	1	5	14	0	2	CES4A	chr16	66983589	67015417
CES4A_chr16_66983589_67015417	0/1	g0002	16	1	7	4	1	2	CES4A	chr16	66983589	67015417
CES4A_chr16_66983589_67015417	0/0	g0003	9	0	2	4	1	2	CES4A	chr16	66983589	67015417
CES4A_chr16_66983589_67015417	0/0	g0004	8	4	3	0	0	1	CES4A	chr16	66983589	67015417
CES4A_chr16_66983589_67015417	0/0	g0005	8	2	1	5	0	0	CES4A	chr16	66983589	67015417
CES4A_chr16_66983589_67015417	0/0	g0006	7	0	0	7	0	0	CES4A	chr16	66983589	67015417
CES4A_chr16_66983589_67015417	0/0	g0007	5	1	3	1	0	0	CES4A	chr16	66983589	67015417
CES4A_chr16_66983589_67015417	0/0	g0008	4	1	1	0	0	2	CES4A	chr16	66983589	67015417
CES4A_chr16_66983589_67015417	0/0	g0009	4	0	0	4	0	0	CES4A	chr16	66983589	67015417
CES4A_chr16_66983589_67015417	0/0	g0010	4	0	1	2	1	0	CES4A	chr16	66983589	67015417
CES4A_chr16_66983589_67015417	0/0	g0011	3	0	0	3	0	0	CES4A	chr16	66983589	67015417
CES4A_chr16_66983589_67015417	0/0	g0012	3	3	0	0	0	0	CES4A	chr16	66983589	67015417
CES4A_chr16_66983589_67015417	0/0	g0013	3	1	0	1	1	0	CES4A	chr16	66983589	67015417