JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	SAS	genename	chr	start	end
CFAP299_chr4_80330730_80968750	0/0	g0053	1	0	0	1	0	CFAP299	chr4	80330730	80968750
CFAP299_chr4_80330730_80968750	0/0	g0054	1	0	0	1	0	CFAP299	chr4	80330730	80968750
CFAP299_chr4_80330730_80968750	0/0	g0055	1	0	0	1	0	CFAP299	chr4	80330730	80968750
CFAP299_chr4_80330730_80968750	0/0	g0056	1	0	1	0	0	CFAP299	chr4	80330730	80968750
CFAP299_chr4_80330730_80968750	0/0	g0057	1	0	0	1	0	CFAP299	chr4	80330730	80968750
CFAP299_chr4_80330730_80968750	0/0	g0058	1	1	0	0	0	CFAP299	chr4	80330730	80968750
CFAP299_chr4_80330730_80968750	0/0	g0059	1	0	0	1	0	CFAP299	chr4	80330730	80968750
CFAP299_chr4_80330730_80968750	0/0	g0060	1	0	0	0	1	CFAP299	chr4	80330730	80968750
CFAP299_chr4_80330730_80968750	0/0	g0061	1	0	1	0	0	CFAP299	chr4	80330730	80968750
CFAP299_chr4_80330730_80968750	0/0	g0062	1	0	0	1	0	CFAP299	chr4	80330730	80968750
CFAP299_chr4_80330730_80968750	0/0	g0063	1	0	0	1	0	CFAP299	chr4	80330730	80968750
CFAP299_chr4_80330730_80968750	0/0	g0064	1	0	0	1	0	CFAP299	chr4	80330730	80968750
CFAP299_chr4_80330730_80968750	0/0	g0065	1	1	0	0	0	CFAP299	chr4	80330730	80968750
CFAP299_chr4_80330730_80968750	0/0	g0066	1	1	0	0	0	CFAP299	chr4	80330730	80968750
CFAP299_chr4_80330730_80968750	0/0	g0067	1	1	0	0	0	CFAP299	chr4	80330730	80968750
CFAP299_chr4_80330730_80968750	0/0	g0068	1	1	0	0	0	CFAP299	chr4	80330730	80968750
CFAP299_chr4_80330730_80968750	0/0	g0069	1	0	0	1	0	CFAP299	chr4	80330730	80968750
CFAP299_chr4_80330730_80968750	0/0	g0070	1	1	0	0	0	CFAP299	chr4	80330730	80968750
CFAP299_chr4_80330730_80968750	0/0	g0071	1	1	0	0	0	CFAP299	chr4	80330730	80968750
CFAP299_chr4_80330730_80968750	0/0	g0072	1	0	0	1	0	CFAP299	chr4	80330730	80968750
CFAP299_chr4_80330730_80968750	0/0	g0073	1	0	1	0	0	CFAP299	chr4	80330730	80968750
CFAP299_chr4_80330730_80968750	0/0	g0074	1	0	0	1	0	CFAP299	chr4	80330730	80968750
CFAP299_chr4_80330730_80968750	0/0	g0075	1	0	0	1	0	CFAP299	chr4	80330730	80968750
CFAP299_chr4_80330730_80968750	0/0	g0076	1	1	0	0	0	CFAP299	chr4	80330730	80968750
CFAP299_chr4_80330730_80968750	0/0	g0077	1	0	0	0	1	CFAP299	chr4	80330730	80968750
CFAP299_chr4_80330730_80968750	0/0	g0078	1	0	0	1	0	CFAP299	chr4	80330730	80968750
CFAP299_chr4_80330730_80968750	0/0	g0079	1	0	0	1	0	CFAP299	chr4	80330730	80968750
CFAP299_chr4_80330730_80968750	0/0	g0080	1	0	0	1	0	CFAP299	chr4	80330730	80968750
CFAP299_chr4_80330730_80968750	0/0	g0081	1	0	1	0	0	CFAP299	chr4	80330730	80968750
CFAP299_chr4_80330730_80968750	0/0	g0082	1	1	0	0	0	CFAP299	chr4	80330730	80968750
CFAP299_chr4_80330730_80968750	0/0	g0083	1	1	0	0	0	CFAP299	chr4	80330730	80968750
CFAP299_chr4_80330730_80968750	0/0	g0084	1	1	0	0	0	CFAP299	chr4	80330730	80968750
CFAP299_chr4_80330730_80968750	0/0	g0085	1	1	0	0	0	CFAP299	chr4	80330730	80968750
CFAP299_chr4_80330730_80968750	0/0	g0086	1	1	0	0	0	CFAP299	chr4	80330730	80968750
CFAP299_chr4_80330730_80968750	0/0	g0087	1	0	1	0	0	CFAP299	chr4	80330730	80968750
CFAP299_chr4_80330730_80968750	0/0	g0088	1	1	0	0	0	CFAP299	chr4	80330730	80968750
CFAP299_chr4_80330730_80968750	0/0	g0089	1	1	0	0	0	CFAP299	chr4	80330730	80968750
CFAP299_chr4_80330730_80968750	0/0	g0090	1	1	0	0	0	CFAP299	chr4	80330730	80968750
CFAP299_chr4_80330730_80968750	0/0	g0091	1	1	0	0	0	CFAP299	chr4	80330730	80968750
CFAP299_chr4_80330730_80968750	0/0	g0092	1	1	0	0	0	CFAP299	chr4	80330730	80968750
CFAP299_chr4_80330730_80968750	0/0	g0093	1	1	0	0	0	CFAP299	chr4	80330730	80968750
CFAP299_chr4_80330730_80968750	0/0	g0094	1	0	0	1	0	CFAP299	chr4	80330730	80968750
CFAP299_chr4_80330730_80968750	0/0	g0095	1	0	0	0	1	CFAP299	chr4	80330730	80968750
CFAP299_chr4_80330730_80968750	0/0	g0096	1	1	0	0	0	CFAP299	chr4	80330730	80968750
CFAP300_chr11_102042437_102089554	0/0	g0001	21	5	8	6	2	CFAP300	chr11	102042437	102089554
CFAP300_chr11_102042437_102089554	0/0	g0002	13	0	4	9	0	CFAP300	chr11	102042437	102089554
CFAP300_chr11_102042437_102089554	0/0	g0003	12	6	5	0	1	CFAP300	chr11	102042437	102089554
CFAP300_chr11_102042437_102089554	0/0	g0004	11	0	0	11	0	CFAP300	chr11	102042437	102089554
CFAP300_chr11_102042437_102089554	0/0	g0005	10	0	1	8	1	CFAP300	chr11	102042437	102089554
CFAP300_chr11_102042437_102089554	0/0	g0006	8	0	0	8	0	CFAP300	chr11	102042437	102089554