JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
CFAP53_chr18_50222193_50271495	1/0	g0347	1	0	0	0	0	0	CFAP53	chr18	50222193	50271495
CFAP53_chr18_50222193_50271495	0/0	g0348	1	1	0	0	0	0	CFAP53	chr18	50222193	50271495
CFAP53_chr18_50222193_50271495	0/0	g0349	1	1	0	0	0	0	CFAP53	chr18	50222193	50271495
CFAP53_chr18_50222193_50271495	0/0	g0350	1	1	0	0	0	0	CFAP53	chr18	50222193	50271495
CFAP53_chr18_50222193_50271495	0/0	g0351	1	1	0	0	0	0	CFAP53	chr18	50222193	50271495
CFAP53_chr18_50222193_50271495	0/0	g0352	1	1	0	0	0	0	CFAP53	chr18	50222193	50271495
CFAP53_chr18_50222193_50271495	0/0	g0353	1	1	0	0	0	0	CFAP53	chr18	50222193	50271495
CFAP53_chr18_50222193_50271495	0/0	g0354	1	1	0	0	0	0	CFAP53	chr18	50222193	50271495
CFAP53_chr18_50222193_50271495	0/0	g0355	1	0	0	1	0	0	CFAP53	chr18	50222193	50271495
CFAP53_chr18_50222193_50271495	0/0	g0356	1	0	1	0	0	0	CFAP53	chr18	50222193	50271495
CFAP53_chr18_50222193_50271495	0/0	g0357	1	0	0	0	0	1	CFAP53	chr18	50222193	50271495
CFAP53_chr18_50222193_50271495	0/0	g0358	1	0	1	0	0	0	CFAP53	chr18	50222193	50271495
CFAP53_chr18_50222193_50271495	0/0	g0359	1	1	0	0	0	0	CFAP53	chr18	50222193	50271495
CFAP53_chr18_50222193_50271495	0/0	g0360	1	1	0	0	0	0	CFAP53	chr18	50222193	50271495
CFAP53_chr18_50222193_50271495	0/0	g0361	1	1	0	0	0	0	CFAP53	chr18	50222193	50271495
CFAP53_chr18_50222193_50271495	0/0	g0362	1	1	0	0	0	0	CFAP53	chr18	50222193	50271495
CFAP53_chr18_50222193_50271495	0/0	g0363	1	0	1	0	0	0	CFAP53	chr18	50222193	50271495
CFAP53_chr18_50222193_50271495	0/0	g0364	1	1	0	0	0	0	CFAP53	chr18	50222193	50271495
CFAP53_chr18_50222193_50271495	0/0	g0365	1	0	0	1	0	0	CFAP53	chr18	50222193	50271495
CFAP53_chr18_50222193_50271495	0/0	g0366	1	0	1	0	0	0	CFAP53	chr18	50222193	50271495
CFAP53_chr18_50222193_50271495	0/0	g0367	1	0	1	0	0	0	CFAP53	chr18	50222193	50271495
CFAP53_chr18_50222193_50271495	0/0	g0368	1	0	1	0	0	0	CFAP53	chr18	50222193	50271495
CFAP54_chr12_96484577_96880555	0/0	g0001	1	0	0	1	0	0	CFAP54	chr12	96484577	96880555
CFAP54_chr12_96484577_96880555	0/0	g0002	1	1	0	0	0	0	CFAP54	chr12	96484577	96880555
CFAP54_chr12_96484577_96880555	0/0	g0003	1	1	0	0	0	0	CFAP54	chr12	96484577	96880555
CFAP54_chr12_96484577_96880555	0/0	g0004	1	1	0	0	0	0	CFAP54	chr12	96484577	96880555
CFAP54_chr12_96484577_96880555	0/0	g0005	1	0	1	0	0	0	CFAP54	chr12	96484577	96880555
CFAP54_chr12_96484577_96880555	0/0	g0006	1	1	0	0	0	0	CFAP54	chr12	96484577	96880555
CFAP54_chr12_96484577_96880555	0/0	g0007	1	0	1	0	0	0	CFAP54	chr12	96484577	96880555
CFAP54_chr12_96484577_96880555	0/0	g0008	1	1	0	0	0	0	CFAP54	chr12	96484577	96880555
CFAP54_chr12_96484577_96880555	0/0	g0009	1	0	1	0	0	0	CFAP54	chr12	96484577	96880555
CFAP54_chr12_96484577_96880555	0/0	g0010	1	0	1	0	0	0	CFAP54	chr12	96484577	96880555
CFAP54_chr12_96484577_96880555	0/0	g0011	1	0	0	1	0	0	CFAP54	chr12	96484577	96880555
CFAP54_chr12_96484577_96880555	0/0	g0012	1	0	1	0	0	0	CFAP54	chr12	96484577	96880555
CFAP54_chr12_96484577_96880555	0/0	g0013	1	0	1	0	0	0	CFAP54	chr12	96484577	96880555
CFAP54_chr12_96484577_96880555	0/0	g0014	1	0	0	1	0	0	CFAP54	chr12	96484577	96880555
CFAP54_chr12_96484577_96880555	0/0	g0015	1	0	0	0	0	1	CFAP54	chr12	96484577	96880555
CFAP54_chr12_96484577_96880555	0/0	g0016	1	0	0	1	0	0	CFAP54	chr12	96484577	96880555
CFAP54_chr12_96484577_96880555	0/0	g0017	1	1	0	0	0	0	CFAP54	chr12	96484577	96880555
CFAP54_chr12_96484577_96880555	0/0	g0018	1	0	1	0	0	0	CFAP54	chr12	96484577	96880555
CFAP54_chr12_96484577_96880555	0/0	g0019	1	0	0	0	0	1	CFAP54	chr12	96484577	96880555
CFAP54_chr12_96484577_96880555	0/0	g0020	1	0	0	0	1	0	CFAP54	chr12	96484577	96880555
CFAP54_chr12_96484577_96880555	0/0	g0021	1	0	0	0	1	0	CFAP54	chr12	96484577	96880555
CFAP54_chr12_96484577_96880555	0/0	g0022	1	0	1	0	0	0	CFAP54	chr12	96484577	96880555
CFAP54_chr12_96484577_96880555	0/0	g0023	1	1	0	0	0	0	CFAP54	chr12	96484577	96880555
CFAP54_chr12_96484577_96880555	0/0	g0024	1	1	0	0	0	0	CFAP54	chr12	96484577	96880555
CFAP54_chr12_96484577_96880555	0/0	g0025	1	1	0	0	0	0	CFAP54	chr12	96484577	96880555
CFAP54_chr12_96484577_96880555	0/0	g0026	1	1	0	0	0	0	CFAP54	chr12	96484577	96880555
CFAP54_chr12_96484577_96880555	0/0	g0027	1	0	0	0	0	1	CFAP54	chr12	96484577	96880555
CFAP54_chr12_96484577_96880555	0/0	g0028	1	0	0	0	0	1	CFAP54	chr12	96484577	96880555