JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ADAMTSL3_chr15_83649123_84044842	0/0	g0242	1	1	0	0	0	0	ADAMTSL3	chr15	83649123	84044842
ADAMTSL3_chr15_83649123_84044842	0/0	g0243	1	1	0	0	0	0	ADAMTSL3	chr15	83649123	84044842
ADAMTSL3_chr15_83649123_84044842	0/0	g0244	1	1	0	0	0	0	ADAMTSL3	chr15	83649123	84044842
ADAMTSL3_chr15_83649123_84044842	0/0	g0245	1	1	0	0	0	0	ADAMTSL3	chr15	83649123	84044842
ADAMTSL3_chr15_83649123_84044842	0/0	g0246	1	0	0	1	0	0	ADAMTSL3	chr15	83649123	84044842
ADAMTSL3_chr15_83649123_84044842	0/0	g0247	1	0	0	1	0	0	ADAMTSL3	chr15	83649123	84044842
ADAMTSL3_chr15_83649123_84044842	0/0	g0248	1	0	0	1	0	0	ADAMTSL3	chr15	83649123	84044842
ADAMTSL3_chr15_83649123_84044842	0/0	g0249	1	0	0	1	0	0	ADAMTSL3	chr15	83649123	84044842
ADAMTSL3_chr15_83649123_84044842	0/0	g0250	1	0	0	1	0	0	ADAMTSL3	chr15	83649123	84044842
ADAMTSL3_chr15_83649123_84044842	0/0	g0251	1	0	0	1	0	0	ADAMTSL3	chr15	83649123	84044842
ADAMTSL3_chr15_83649123_84044842	0/0	g0252	1	0	0	1	0	0	ADAMTSL3	chr15	83649123	84044842
ADAMTSL3_chr15_83649123_84044842	0/0	g0253	1	0	0	1	0	0	ADAMTSL3	chr15	83649123	84044842
ADAMTSL3_chr15_83649123_84044842	0/0	g0254	1	0	0	1	0	0	ADAMTSL3	chr15	83649123	84044842
ADAMTSL3_chr15_83649123_84044842	0/0	g0255	1	0	0	0	0	1	ADAMTSL3	chr15	83649123	84044842
ADAMTSL3_chr15_83649123_84044842	0/0	g0256	1	0	0	0	1	0	ADAMTSL3	chr15	83649123	84044842
ADAMTSL3_chr15_83649123_84044842	0/0	g0257	1	0	1	0	0	0	ADAMTSL3	chr15	83649123	84044842
ADAMTSL3_chr15_83649123_84044842	0/0	g0258	1	0	0	0	0	1	ADAMTSL3	chr15	83649123	84044842
ADAMTSL3_chr15_83649123_84044842	0/0	g0259	1	0	1	0	0	0	ADAMTSL3	chr15	83649123	84044842
ADAMTSL3_chr15_83649123_84044842	0/0	g0260	1	0	0	0	0	1	ADAMTSL3	chr15	83649123	84044842
ADAMTSL3_chr15_83649123_84044842	0/0	g0261	1	0	1	0	0	0	ADAMTSL3	chr15	83649123	84044842
ADAMTSL3_chr15_83649123_84044842	0/0	g0262	1	0	0	0	1	0	ADAMTSL3	chr15	83649123	84044842
ADAMTSL3_chr15_83649123_84044842	0/0	g0263	1	0	0	0	1	0	ADAMTSL3	chr15	83649123	84044842
ADAMTSL3_chr15_83649123_84044842	0/0	g0264	1	0	0	1	0	0	ADAMTSL3	chr15	83649123	84044842
ADAMTSL3_chr15_83649123_84044842	0/0	g0265	1	0	0	1	0	0	ADAMTSL3	chr15	83649123	84044842
ADAMTSL3_chr15_83649123_84044842	0/0	g0266	1	0	0	1	0	0	ADAMTSL3	chr15	83649123	84044842
ADAMTSL3_chr15_83649123_84044842	0/0	g0267	1	0	0	1	0	0	ADAMTSL3	chr15	83649123	84044842
ADAMTSL3_chr15_83649123_84044842	0/0	g0268	1	0	1	0	0	0	ADAMTSL3	chr15	83649123	84044842
ADAMTSL3_chr15_83649123_84044842	0/0	g0269	1	0	0	1	0	0	ADAMTSL3	chr15	83649123	84044842
ADAMTSL3_chr15_83649123_84044842	0/0	g0270	1	0	0	1	0	0	ADAMTSL3	chr15	83649123	84044842
ADAMTSL3_chr15_83649123_84044842	0/0	g0271	1	0	0	1	0	0	ADAMTSL3	chr15	83649123	84044842
ADAMTSL3_chr15_83649123_84044842	0/0	g0272	1	0	0	1	0	0	ADAMTSL3	chr15	83649123	84044842
ADAMTSL3_chr15_83649123_84044842	0/0	g0273	1	0	0	1	0	0	ADAMTSL3	chr15	83649123	84044842
ADAMTSL3_chr15_83649123_84044842	0/0	g0274	1	0	0	0	0	1	ADAMTSL3	chr15	83649123	84044842
ADAMTSL4_chr1_150544408_150565933	0/0	g0001	64	6	11	36	2	9	ADAMTSL4	chr1	150544408	150565933
ADAMTSL4_chr1_150544408_150565933	0/0	g0002	63	3	19	25	2	14	ADAMTSL4	chr1	150544408	150565933
ADAMTSL4_chr1_150544408_150565933	0/0	g0003	50	0	3	37	3	7	ADAMTSL4	chr1	150544408	150565933
ADAMTSL4_chr1_150544408_150565933	0/0	g0004	30	1	2	21	4	2	ADAMTSL4	chr1	150544408	150565933
ADAMTSL4_chr1_150544408_150565933	0/0	g0005	20	0	4	12	0	4	ADAMTSL4	chr1	150544408	150565933
ADAMTSL4_chr1_150544408_150565933	0/0	g0006	20	1	0	18	0	1	ADAMTSL4	chr1	150544408	150565933
ADAMTSL4_chr1_150544408_150565933	0/0	g0007	18	0	11	1	2	4	ADAMTSL4	chr1	150544408	150565933
ADAMTSL4_chr1_150544408_150565933	0/0	g0008	12	9	1	0	2	0	ADAMTSL4	chr1	150544408	150565933
ADAMTSL4_chr1_150544408_150565933	0/0	g0009	7	7	0	0	0	0	ADAMTSL4	chr1	150544408	150565933
ADAMTSL4_chr1_150544408_150565933	0/0	g0010	7	6	1	0	0	0	ADAMTSL4	chr1	150544408	150565933
ADAMTSL4_chr1_150544408_150565933	0/0	g0011	6	0	1	4	0	1	ADAMTSL4	chr1	150544408	150565933
ADAMTSL4_chr1_150544408_150565933	1/0	g0012	5	4	0	0	0	0	ADAMTSL4	chr1	150544408	150565933
ADAMTSL4_chr1_150544408_150565933	0/0	g0013	5	0	5	0	0	0	ADAMTSL4	chr1	150544408	150565933
ADAMTSL4_chr1_150544408_150565933	0/0	g0014	5	5	0	0	0	0	ADAMTSL4	chr1	150544408	150565933
ADAMTSL4_chr1_150544408_150565933	0/0	g0015	5	5	0	0	0	0	ADAMTSL4	chr1	150544408	150565933
ADAMTSL4_chr1_150544408_150565933	0/0	g0016	4	0	3	0	1	0	ADAMTSL4	chr1	150544408	150565933
ADAMTSL4_chr1_150544408_150565933	0/0	g0017	4	0	0	4	0	0	ADAMTSL4	chr1	150544408	150565933