JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ADCK2_chr7_140667945_140700110	0/0	g0161	1	0	1	0	0	0	ADCK2	chr7	140667945	140700110
ADCK2_chr7_140667945_140700110	0/0	g0162	1	0	0	0	0	1	ADCK2	chr7	140667945	140700110
ADCK2_chr7_140667945_140700110	0/0	g0163	1	0	0	0	0	1	ADCK2	chr7	140667945	140700110
ADCK2_chr7_140667945_140700110	0/0	g0164	1	1	0	0	0	0	ADCK2	chr7	140667945	140700110
ADCK2_chr7_140667945_140700110	0/0	g0165	1	1	0	0	0	0	ADCK2	chr7	140667945	140700110
ADCK2_chr7_140667945_140700110	0/0	g0166	1	0	1	0	0	0	ADCK2	chr7	140667945	140700110
ADCK2_chr7_140667945_140700110	0/0	g0167	1	0	0	0	0	1	ADCK2	chr7	140667945	140700110
ADCK5_chr8_144369047_144398242	0/0	g0001	40	0	7	26	0	7	ADCK5	chr8	144369047	144398242
ADCK5_chr8_144369047_144398242	0/0	g0002	23	3	5	11	1	3	ADCK5	chr8	144369047	144398242
ADCK5_chr8_144369047_144398242	0/0	g0003	7	0	1	4	0	2	ADCK5	chr8	144369047	144398242
ADCK5_chr8_144369047_144398242	0/0	g0004	6	5	1	0	0	0	ADCK5	chr8	144369047	144398242
ADCK5_chr8_144369047_144398242	0/0	g0005	6	0	2	0	4	0	ADCK5	chr8	144369047	144398242
ADCK5_chr8_144369047_144398242	0/0	g0006	6	1	3	0	2	0	ADCK5	chr8	144369047	144398242
ADCK5_chr8_144369047_144398242	0/0	g0007	5	5	0	0	0	0	ADCK5	chr8	144369047	144398242
ADCK5_chr8_144369047_144398242	0/0	g0008	4	4	0	0	0	0	ADCK5	chr8	144369047	144398242
ADCK5_chr8_144369047_144398242	0/0	g0009	4	1	3	0	0	0	ADCK5	chr8	144369047	144398242
ADCK5_chr8_144369047_144398242	0/0	g0010	4	1	1	1	0	1	ADCK5	chr8	144369047	144398242
ADCK5_chr8_144369047_144398242	0/0	g0011	4	0	1	3	0	0	ADCK5	chr8	144369047	144398242
ADCK5_chr8_144369047_144398242	0/1	g0012	4	0	1	2	0	0	ADCK5	chr8	144369047	144398242
ADCK5_chr8_144369047_144398242	0/0	g0013	3	3	0	0	0	0	ADCK5	chr8	144369047	144398242
ADCK5_chr8_144369047_144398242	0/0	g0014	3	3	0	0	0	0	ADCK5	chr8	144369047	144398242
ADCK5_chr8_144369047_144398242	0/0	g0015	3	3	0	0	0	0	ADCK5	chr8	144369047	144398242
ADCK5_chr8_144369047_144398242	0/0	g0016	3	0	3	0	0	0	ADCK5	chr8	144369047	144398242
ADCK5_chr8_144369047_144398242	0/0	g0017	3	0	0	2	0	1	ADCK5	chr8	144369047	144398242
ADCK5_chr8_144369047_144398242	0/0	g0018	3	2	1	0	0	0	ADCK5	chr8	144369047	144398242
ADCK5_chr8_144369047_144398242	0/0	g0019	3	0	0	3	0	0	ADCK5	chr8	144369047	144398242
ADCK5_chr8_144369047_144398242	0/0	g0020	3	0	0	3	0	0	ADCK5	chr8	144369047	144398242
ADCK5_chr8_144369047_144398242	0/0	g0021	3	3	0	0	0	0	ADCK5	chr8	144369047	144398242
ADCK5_chr8_144369047_144398242	0/0	g0022	3	2	0	1	0	0	ADCK5	chr8	144369047	144398242
ADCK5_chr8_144369047_144398242	0/0	g0023	2	2	0	0	0	0	ADCK5	chr8	144369047	144398242
ADCK5_chr8_144369047_144398242	0/0	g0024	2	0	0	0	0	2	ADCK5	chr8	144369047	144398242
ADCK5_chr8_144369047_144398242	0/0	g0025	2	0	0	1	1	0	ADCK5	chr8	144369047	144398242
ADCK5_chr8_144369047_144398242	0/0	g0026	2	0	1	1	0	0	ADCK5	chr8	144369047	144398242
ADCK5_chr8_144369047_144398242	0/0	g0027	2	0	0	0	1	1	ADCK5	chr8	144369047	144398242
ADCK5_chr8_144369047_144398242	0/0	g0028	2	0	0	2	0	0	ADCK5	chr8	144369047	144398242
ADCK5_chr8_144369047_144398242	0/0	g0029	2	2	0	0	0	0	ADCK5	chr8	144369047	144398242
ADCK5_chr8_144369047_144398242	0/0	g0030	2	2	0	0	0	0	ADCK5	chr8	144369047	144398242
ADCK5_chr8_144369047_144398242	0/0	g0031	2	2	0	0	0	0	ADCK5	chr8	144369047	144398242
ADCK5_chr8_144369047_144398242	0/0	g0032	2	0	1	0	1	0	ADCK5	chr8	144369047	144398242
ADCK5_chr8_144369047_144398242	0/0	g0033	2	0	0	2	0	0	ADCK5	chr8	144369047	144398242
ADCK5_chr8_144369047_144398242	0/0	g0034	2	0	2	0	0	0	ADCK5	chr8	144369047	144398242
ADCK5_chr8_144369047_144398242	0/0	g0035	2	0	1	1	0	0	ADCK5	chr8	144369047	144398242
ADCK5_chr8_144369047_144398242	0/0	g0036	2	0	0	1	0	1	ADCK5	chr8	144369047	144398242
ADCK5_chr8_144369047_144398242	0/0	g0037	2	2	0	0	0	0	ADCK5	chr8	144369047	144398242
ADCK5_chr8_144369047_144398242	0/0	g0038	2	0	0	0	0	2	ADCK5	chr8	144369047	144398242
ADCK5_chr8_144369047_144398242	0/0	g0039	1	1	0	0	0	0	ADCK5	chr8	144369047	144398242
ADCK5_chr8_144369047_144398242	0/0	g0040	1	0	0	1	0	0	ADCK5	chr8	144369047	144398242
ADCK5_chr8_144369047_144398242	0/0	g0041	1	1	0	0	0	0	ADCK5	chr8	144369047	144398242
ADCK5_chr8_144369047_144398242	0/0	g0042	1	1	0	0	0	0	ADCK5	chr8	144369047	144398242
ADCK5_chr8_144369047_144398242	0/0	g0043	1	1	0	0	0	0	ADCK5	chr8	144369047	144398242