JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ADCY3_chr2_24814169_24925237	0/0	g0247	1	0	1	0	0	0	ADCY3	chr2	24814169	24925237
ADCY3_chr2_24814169_24925237	0/0	g0248	1	0	0	1	0	0	ADCY3	chr2	24814169	24925237
ADCY3_chr2_24814169_24925237	0/0	g0249	1	0	1	0	0	0	ADCY3	chr2	24814169	24925237
ADCY3_chr2_24814169_24925237	0/0	g0250	1	0	1	0	0	0	ADCY3	chr2	24814169	24925237
ADCY3_chr2_24814169_24925237	0/0	g0251	1	1	0	0	0	0	ADCY3	chr2	24814169	24925237
ADCY3_chr2_24814169_24925237	0/0	g0252	1	0	1	0	0	0	ADCY3	chr2	24814169	24925237
ADCY3_chr2_24814169_24925237	0/0	g0253	1	0	1	0	0	0	ADCY3	chr2	24814169	24925237
ADCY3_chr2_24814169_24925237	0/0	g0254	1	1	0	0	0	0	ADCY3	chr2	24814169	24925237
ADCY3_chr2_24814169_24925237	0/0	g0255	1	0	1	0	0	0	ADCY3	chr2	24814169	24925237
ADCY3_chr2_24814169_24925237	0/0	g0256	1	1	0	0	0	0	ADCY3	chr2	24814169	24925237
ADCY3_chr2_24814169_24925237	0/0	g0257	1	1	0	0	0	0	ADCY3	chr2	24814169	24925237
ADCY3_chr2_24814169_24925237	0/0	g0258	1	1	0	0	0	0	ADCY3	chr2	24814169	24925237
ADCY3_chr2_24814169_24925237	0/0	g0259	1	1	0	0	0	0	ADCY3	chr2	24814169	24925237
ADCY3_chr2_24814169_24925237	0/0	g0260	1	1	0	0	0	0	ADCY3	chr2	24814169	24925237
ADCY3_chr2_24814169_24925237	0/0	g0261	1	1	0	0	0	0	ADCY3	chr2	24814169	24925237
ADCY3_chr2_24814169_24925237	0/0	g0262	1	1	0	0	0	0	ADCY3	chr2	24814169	24925237
ADCY3_chr2_24814169_24925237	0/0	g0263	1	1	0	0	0	0	ADCY3	chr2	24814169	24925237
ADCY3_chr2_24814169_24925237	0/0	g0264	1	1	0	0	0	0	ADCY3	chr2	24814169	24925237
ADCY3_chr2_24814169_24925237	0/0	g0265	1	1	0	0	0	0	ADCY3	chr2	24814169	24925237
ADCY3_chr2_24814169_24925237	0/0	g0266	1	1	0	0	0	0	ADCY3	chr2	24814169	24925237
ADCY3_chr2_24814169_24925237	0/0	g0267	1	1	0	0	0	0	ADCY3	chr2	24814169	24925237
ADCY3_chr2_24814169_24925237	0/0	g0268	1	0	1	0	0	0	ADCY3	chr2	24814169	24925237
ADCY3_chr2_24814169_24925237	0/0	g0269	1	0	0	0	0	1	ADCY3	chr2	24814169	24925237
ADCY3_chr2_24814169_24925237	0/0	g0270	1	0	0	0	0	1	ADCY3	chr2	24814169	24925237
ADCY3_chr2_24814169_24925237	0/0	g0271	1	0	1	0	0	0	ADCY3	chr2	24814169	24925237
ADCY4_chr14_24313359_24340071	0/0	g0001	16	0	7	4	1	4	ADCY4	chr14	24313359	24340071
ADCY4_chr14_24313359_24340071	0/0	g0002	13	0	9	0	2	2	ADCY4	chr14	24313359	24340071
ADCY4_chr14_24313359_24340071	0/0	g0003	9	0	0	9	0	0	ADCY4	chr14	24313359	24340071
ADCY4_chr14_24313359_24340071	0/0	g0004	8	0	0	8	0	0	ADCY4	chr14	24313359	24340071
ADCY4_chr14_24313359_24340071	0/0	g0005	6	0	0	5	0	1	ADCY4	chr14	24313359	24340071
ADCY4_chr14_24313359_24340071	0/0	g0006	5	0	2	1	0	2	ADCY4	chr14	24313359	24340071
ADCY4_chr14_24313359_24340071	0/0	g0007	5	0	0	5	0	0	ADCY4	chr14	24313359	24340071
ADCY4_chr14_24313359_24340071	0/0	g0008	4	0	0	3	1	0	ADCY4	chr14	24313359	24340071
ADCY4_chr14_24313359_24340071	0/0	g0009	4	0	1	3	0	0	ADCY4	chr14	24313359	24340071
ADCY4_chr14_24313359_24340071	0/0	g0010	4	0	0	4	0	0	ADCY4	chr14	24313359	24340071
ADCY4_chr14_24313359_24340071	0/0	g0011	4	0	0	4	0	0	ADCY4	chr14	24313359	24340071
ADCY4_chr14_24313359_24340071	0/0	g0012	3	3	0	0	0	0	ADCY4	chr14	24313359	24340071
ADCY4_chr14_24313359_24340071	0/0	g0013	3	0	0	3	0	0	ADCY4	chr14	24313359	24340071
ADCY4_chr14_24313359_24340071	0/1	g0014	3	0	0	0	1	1	ADCY4	chr14	24313359	24340071
ADCY4_chr14_24313359_24340071	0/0	g0015	3	3	0	0	0	0	ADCY4	chr14	24313359	24340071
ADCY4_chr14_24313359_24340071	0/0	g0016	3	0	0	3	0	0	ADCY4	chr14	24313359	24340071
ADCY4_chr14_24313359_24340071	0/0	g0017	3	0	0	3	0	0	ADCY4	chr14	24313359	24340071
ADCY4_chr14_24313359_24340071	0/0	g0018	3	0	0	3	0	0	ADCY4	chr14	24313359	24340071
ADCY4_chr14_24313359_24340071	0/0	g0019	3	0	0	3	0	0	ADCY4	chr14	24313359	24340071
ADCY4_chr14_24313359_24340071	0/0	g0020	3	0	0	3	0	0	ADCY4	chr14	24313359	24340071
ADCY4_chr14_24313359_24340071	0/0	g0021	3	3	0	0	0	0	ADCY4	chr14	24313359	24340071
ADCY4_chr14_24313359_24340071	0/0	g0022	3	1	1	0	0	1	ADCY4	chr14	24313359	24340071
ADCY4_chr14_24313359_24340071	0/0	g0023	3	3	0	0	0	0	ADCY4	chr14	24313359	24340071
ADCY4_chr14_24313359_24340071	0/0	g0024	2	0	0	2	0	0	ADCY4	chr14	24313359	24340071
ADCY4_chr14_24313359_24340071	0/0	g0025	2	0	0	2	0	0	ADCY4	chr14	24313359	24340071