JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ADGRB1_chr8_142444649_142550007	0/0	g0276	1	1	0	0	0	0	ADGRB1	chr8	142444649	142550007
ADGRB1_chr8_142444649_142550007	0/0	g0277	1	0	0	1	0	0	ADGRB1	chr8	142444649	142550007
ADGRB1_chr8_142444649_142550007	0/0	g0278	1	0	0	0	0	1	ADGRB1	chr8	142444649	142550007
ADGRB1_chr8_142444649_142550007	0/0	g0279	1	0	0	1	0	0	ADGRB1	chr8	142444649	142550007
ADGRB1_chr8_142444649_142550007	0/0	g0280	1	0	0	1	0	0	ADGRB1	chr8	142444649	142550007
ADGRB1_chr8_142444649_142550007	0/0	g0281	1	0	1	0	0	0	ADGRB1	chr8	142444649	142550007
ADGRB1_chr8_142444649_142550007	0/0	g0282	1	1	0	0	0	0	ADGRB1	chr8	142444649	142550007
ADGRB1_chr8_142444649_142550007	0/0	g0283	1	0	0	1	0	0	ADGRB1	chr8	142444649	142550007
ADGRB1_chr8_142444649_142550007	0/0	g0284	1	0	0	1	0	0	ADGRB1	chr8	142444649	142550007
ADGRB1_chr8_142444649_142550007	0/0	g0285	1	0	0	1	0	0	ADGRB1	chr8	142444649	142550007
ADGRB1_chr8_142444649_142550007	0/0	g0286	1	0	0	1	0	0	ADGRB1	chr8	142444649	142550007
ADGRB1_chr8_142444649_142550007	0/0	g0287	1	1	0	0	0	0	ADGRB1	chr8	142444649	142550007
ADGRB1_chr8_142444649_142550007	0/0	g0288	1	1	0	0	0	0	ADGRB1	chr8	142444649	142550007
ADGRB1_chr8_142444649_142550007	0/0	g0289	1	1	0	0	0	0	ADGRB1	chr8	142444649	142550007
ADGRB1_chr8_142444649_142550007	0/0	g0290	1	1	0	0	0	0	ADGRB1	chr8	142444649	142550007
ADGRB1_chr8_142444649_142550007	0/0	g0291	1	1	0	0	0	0	ADGRB1	chr8	142444649	142550007
ADGRB1_chr8_142444649_142550007	0/0	g0292	1	1	0	0	0	0	ADGRB1	chr8	142444649	142550007
ADGRB1_chr8_142444649_142550007	0/0	g0293	1	1	0	0	0	0	ADGRB1	chr8	142444649	142550007
ADGRB1_chr8_142444649_142550007	0/0	g0294	1	1	0	0	0	0	ADGRB1	chr8	142444649	142550007
ADGRB1_chr8_142444649_142550007	0/0	g0295	1	1	0	0	0	0	ADGRB1	chr8	142444649	142550007
ADGRB1_chr8_142444649_142550007	0/0	g0296	1	1	0	0	0	0	ADGRB1	chr8	142444649	142550007
ADGRB1_chr8_142444649_142550007	0/0	g0297	1	1	0	0	0	0	ADGRB1	chr8	142444649	142550007
ADGRB1_chr8_142444649_142550007	0/0	g0298	1	1	0	0	0	0	ADGRB1	chr8	142444649	142550007
ADGRB1_chr8_142444649_142550007	0/0	g0299	1	1	0	0	0	0	ADGRB1	chr8	142444649	142550007
ADGRB1_chr8_142444649_142550007	0/0	g0300	1	0	1	0	0	0	ADGRB1	chr8	142444649	142550007
ADGRB1_chr8_142444649_142550007	0/0	g0301	1	0	1	0	0	0	ADGRB1	chr8	142444649	142550007
ADGRB1_chr8_142444649_142550007	0/0	g0302	1	1	0	0	0	0	ADGRB1	chr8	142444649	142550007
ADGRB1_chr8_142444649_142550007	0/0	g0303	1	1	0	0	0	0	ADGRB1	chr8	142444649	142550007
ADGRB2_chr1_31722117_31769340	0/0	g0001	6	0	5	1	0	0	ADGRB2	chr1	31722117	31769340
ADGRB2_chr1_31722117_31769340	0/0	g0002	5	1	1	3	0	0	ADGRB2	chr1	31722117	31769340
ADGRB2_chr1_31722117_31769340	0/0	g0003	4	0	2	2	0	0	ADGRB2	chr1	31722117	31769340
ADGRB2_chr1_31722117_31769340	0/0	g0004	4	4	0	0	0	0	ADGRB2	chr1	31722117	31769340
ADGRB2_chr1_31722117_31769340	0/0	g0005	3	1	0	2	0	0	ADGRB2	chr1	31722117	31769340
ADGRB2_chr1_31722117_31769340	0/0	g0006	3	2	1	0	0	0	ADGRB2	chr1	31722117	31769340
ADGRB2_chr1_31722117_31769340	0/0	g0007	3	0	0	1	2	0	ADGRB2	chr1	31722117	31769340
ADGRB2_chr1_31722117_31769340	0/1	g0008	3	0	1	0	1	0	ADGRB2	chr1	31722117	31769340
ADGRB2_chr1_31722117_31769340	0/0	g0009	3	0	3	0	0	0	ADGRB2	chr1	31722117	31769340
ADGRB2_chr1_31722117_31769340	0/0	g0010	3	0	3	0	0	0	ADGRB2	chr1	31722117	31769340
ADGRB2_chr1_31722117_31769340	0/0	g0011	3	0	0	2	0	1	ADGRB2	chr1	31722117	31769340
ADGRB2_chr1_31722117_31769340	0/0	g0012	3	0	0	3	0	0	ADGRB2	chr1	31722117	31769340
ADGRB2_chr1_31722117_31769340	0/0	g0013	3	2	1	0	0	0	ADGRB2	chr1	31722117	31769340
ADGRB2_chr1_31722117_31769340	0/0	g0014	2	2	0	0	0	0	ADGRB2	chr1	31722117	31769340
ADGRB2_chr1_31722117_31769340	0/0	g0015	2	2	0	0	0	0	ADGRB2	chr1	31722117	31769340
ADGRB2_chr1_31722117_31769340	0/0	g0016	2	1	0	1	0	0	ADGRB2	chr1	31722117	31769340
ADGRB2_chr1_31722117_31769340	0/0	g0017	2	2	0	0	0	0	ADGRB2	chr1	31722117	31769340
ADGRB2_chr1_31722117_31769340	0/0	g0018	2	0	2	0	0	0	ADGRB2	chr1	31722117	31769340
ADGRB2_chr1_31722117_31769340	0/0	g0019	2	0	0	2	0	0	ADGRB2	chr1	31722117	31769340
ADGRB2_chr1_31722117_31769340	0/0	g0020	2	2	0	0	0	0	ADGRB2	chr1	31722117	31769340
ADGRB2_chr1_31722117_31769340	0/0	g0021	2	2	0	0	0	0	ADGRB2	chr1	31722117	31769340
ADGRB2_chr1_31722117_31769340	0/0	g0022	2	0	1	1	0	0	ADGRB2	chr1	31722117	31769340