JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	SAS	genename	chr	start	end
ADGRG5_chr16_57537643_57582189	0/0	g0297	1	0	0	1	0	ADGRG5	chr16	57537643	57582189
ADGRG5_chr16_57537643_57582189	0/0	g0298	1	0	0	1	0	ADGRG5	chr16	57537643	57582189
ADGRG5_chr16_57537643_57582189	0/0	g0299	1	0	0	1	0	ADGRG5	chr16	57537643	57582189
ADGRG5_chr16_57537643_57582189	0/0	g0300	1	1	0	0	0	ADGRG5	chr16	57537643	57582189
ADGRG5_chr16_57537643_57582189	0/0	g0301	1	1	0	0	0	ADGRG5	chr16	57537643	57582189
ADGRG5_chr16_57537643_57582189	0/0	g0302	1	1	0	0	0	ADGRG5	chr16	57537643	57582189
ADGRG5_chr16_57537643_57582189	0/0	g0303	1	1	0	0	0	ADGRG5	chr16	57537643	57582189
ADGRG5_chr16_57537643_57582189	0/0	g0304	1	1	0	0	0	ADGRG5	chr16	57537643	57582189
ADGRG5_chr16_57537643_57582189	0/0	g0305	1	1	0	0	0	ADGRG5	chr16	57537643	57582189
ADGRG5_chr16_57537643_57582189	0/0	g0306	1	1	0	0	0	ADGRG5	chr16	57537643	57582189
ADGRG5_chr16_57537643_57582189	0/0	g0307	1	1	0	0	0	ADGRG5	chr16	57537643	57582189
ADGRG5_chr16_57537643_57582189	0/0	g0308	1	1	0	0	0	ADGRG5	chr16	57537643	57582189
ADGRG5_chr16_57537643_57582189	0/0	g0309	1	1	0	0	0	ADGRG5	chr16	57537643	57582189
ADGRG5_chr16_57537643_57582189	0/0	g0310	1	1	0	0	0	ADGRG5	chr16	57537643	57582189
ADGRG5_chr16_57537643_57582189	0/0	g0311	1	1	0	0	0	ADGRG5	chr16	57537643	57582189
ADGRG5_chr16_57537643_57582189	0/0	g0312	1	0	0	1	0	ADGRG5	chr16	57537643	57582189
ADGRG5_chr16_57537643_57582189	0/0	g0313	1	0	0	1	0	ADGRG5	chr16	57537643	57582189
ADGRG5_chr16_57537643_57582189	0/0	g0314	1	1	0	0	0	ADGRG5	chr16	57537643	57582189
ADGRG5_chr16_57537643_57582189	0/0	g0315	1	1	0	0	0	ADGRG5	chr16	57537643	57582189
ADGRG5_chr16_57537643_57582189	0/0	g0316	1	0	1	0	0	ADGRG5	chr16	57537643	57582189
ADGRG5_chr16_57537643_57582189	0/0	g0317	1	0	0	1	0	ADGRG5	chr16	57537643	57582189
ADGRG5_chr16_57537643_57582189	0/0	g0318	1	0	1	0	0	ADGRG5	chr16	57537643	57582189
ADGRG5_chr16_57537643_57582189	0/0	g0319	1	1	0	0	0	ADGRG5	chr16	57537643	57582189
ADGRG5_chr16_57537643_57582189	0/0	g0320	1	1	0	0	0	ADGRG5	chr16	57537643	57582189
ADGRG5_chr16_57537643_57582189	0/0	g0321	1	1	0	0	0	ADGRG5	chr16	57537643	57582189
ADGRG5_chr16_57537643_57582189	0/0	g0322	1	1	0	0	0	ADGRG5	chr16	57537643	57582189
ADGRG5_chr16_57537643_57582189	0/0	g0323	1	0	0	0	1	ADGRG5	chr16	57537643	57582189
ADGRG5_chr16_57537643_57582189	0/0	g0324	1	0	0	0	1	ADGRG5	chr16	57537643	57582189
ADGRG5_chr16_57537643_57582189	0/0	g0325	1	1	0	0	0	ADGRG5	chr16	57537643	57582189
ADGRG5_chr16_57537643_57582189	0/0	g0326	1	0	1	0	0	ADGRG5	chr16	57537643	57582189
ADGRG5_chr16_57537643_57582189	0/0	g0327	1	0	0	0	1	ADGRG5	chr16	57537643	57582189
ADGRG5_chr16_57537643_57582189	0/0	g0328	1	0	0	0	1	ADGRG5	chr16	57537643	57582189
ADGRG6_chr6_142297007_142451261	0/0	g0001	1	1	0	0	0	ADGRG6	chr6	142297007	142451261
ADGRG6_chr6_142297007_142451261	0/0	g0002	1	1	0	0	0	ADGRG6	chr6	142297007	142451261
ADGRG6_chr6_142297007_142451261	0/0	g0003	1	1	0	0	0	ADGRG6	chr6	142297007	142451261
ADGRG6_chr6_142297007_142451261	0/0	g0004	1	1	0	0	0	ADGRG6	chr6	142297007	142451261
ADGRG6_chr6_142297007_142451261	0/0	g0005	1	1	0	0	0	ADGRG6	chr6	142297007	142451261
ADGRG6_chr6_142297007_142451261	0/0	g0006	1	1	0	0	0	ADGRG6	chr6	142297007	142451261
ADGRG6_chr6_142297007_142451261	0/0	g0007	1	1	0	0	0	ADGRG6	chr6	142297007	142451261
ADGRG6_chr6_142297007_142451261	0/0	g0008	1	1	0	0	0	ADGRG6	chr6	142297007	142451261
ADGRG6_chr6_142297007_142451261	0/0	g0009	1	1	0	0	0	ADGRG6	chr6	142297007	142451261
ADGRG6_chr6_142297007_142451261	0/0	g0010	1	0	0	1	0	ADGRG6	chr6	142297007	142451261
ADGRG6_chr6_142297007_142451261	0/0	g0011	1	0	0	1	0	ADGRG6	chr6	142297007	142451261
ADGRG6_chr6_142297007_142451261	0/0	g0012	1	0	0	1	0	ADGRG6	chr6	142297007	142451261
ADGRG6_chr6_142297007_142451261	0/0	g0013	1	0	1	0	0	ADGRG6	chr6	142297007	142451261
ADGRG6_chr6_142297007_142451261	0/0	g0014	1	0	1	0	0	ADGRG6	chr6	142297007	142451261
ADGRG6_chr6_142297007_142451261	0/0	g0015	1	0	1	0	0	ADGRG6	chr6	142297007	142451261
ADGRG6_chr6_142297007_142451261	0/0	g0016	1	0	1	0	0	ADGRG6	chr6	142297007	142451261
ADGRG6_chr6_142297007_142451261	0/0	g0017	1	0	1	0	0	ADGRG6	chr6	142297007	142451261
ADGRG6_chr6_142297007_142451261	0/0	g0018	1	0	1	0	0	ADGRG6	chr6	142297007	142451261