JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ADH4_chr4_99118658_99149297	0/0	g0087	1	1	0	0	0	0	ADH4	chr4	99118658	99149297
ADH4_chr4_99118658_99149297	0/0	g0088	1	1	0	0	0	0	ADH4	chr4	99118658	99149297
ADH4_chr4_99118658_99149297	0/0	g0089	1	1	0	0	0	0	ADH4	chr4	99118658	99149297
ADH4_chr4_99118658_99149297	0/0	g0090	1	0	0	0	1	0	ADH4	chr4	99118658	99149297
ADH4_chr4_99118658_99149297	0/0	g0091	1	1	0	0	0	0	ADH4	chr4	99118658	99149297
ADH4_chr4_99118658_99149297	0/0	g0092	1	1	0	0	0	0	ADH4	chr4	99118658	99149297
ADH4_chr4_99118658_99149297	0/0	g0093	1	1	0	0	0	0	ADH4	chr4	99118658	99149297
ADH4_chr4_99118658_99149297	0/0	g0094	1	0	0	0	0	1	ADH4	chr4	99118658	99149297
ADH4_chr4_99118658_99149297	0/0	g0095	1	1	0	0	0	0	ADH4	chr4	99118658	99149297
ADH4_chr4_99118658_99149297	0/0	g0096	1	1	0	0	0	0	ADH4	chr4	99118658	99149297
ADH4_chr4_99118658_99149297	0/0	g0097	1	1	0	0	0	0	ADH4	chr4	99118658	99149297
ADH5_chr4_99065978_99093788	0/0	g0001	37	11	7	16	1	2	ADH5	chr4	99065978	99093788
ADH5_chr4_99065978_99093788	0/0	g0002	27	0	2	22	3	0	ADH5	chr4	99065978	99093788
ADH5_chr4_99065978_99093788	0/0	g0003	22	4	8	10	0	0	ADH5	chr4	99065978	99093788
ADH5_chr4_99065978_99093788	0/0	g0004	21	0	0	19	0	2	ADH5	chr4	99065978	99093788
ADH5_chr4_99065978_99093788	0/0	g0005	13	2	1	8	0	2	ADH5	chr4	99065978	99093788
ADH5_chr4_99065978_99093788	0/0	g0006	10	0	3	5	0	2	ADH5	chr4	99065978	99093788
ADH5_chr4_99065978_99093788	0/0	g0007	6	0	0	3	1	2	ADH5	chr4	99065978	99093788
ADH5_chr4_99065978_99093788	0/0	g0008	6	1	1	4	0	0	ADH5	chr4	99065978	99093788
ADH5_chr4_99065978_99093788	0/0	g0009	4	4	0	0	0	0	ADH5	chr4	99065978	99093788
ADH5_chr4_99065978_99093788	0/0	g0010	4	1	2	0	0	1	ADH5	chr4	99065978	99093788
ADH5_chr4_99065978_99093788	0/0	g0011	4	0	4	0	0	0	ADH5	chr4	99065978	99093788
ADH5_chr4_99065978_99093788	0/0	g0012	4	0	0	4	0	0	ADH5	chr4	99065978	99093788
ADH5_chr4_99065978_99093788	0/0	g0013	4	4	0	0	0	0	ADH5	chr4	99065978	99093788
ADH5_chr4_99065978_99093788	0/0	g0014	3	0	0	0	3	0	ADH5	chr4	99065978	99093788
ADH5_chr4_99065978_99093788	0/0	g0015	3	0	1	2	0	0	ADH5	chr4	99065978	99093788
ADH5_chr4_99065978_99093788	0/0	g0016	3	0	3	0	0	0	ADH5	chr4	99065978	99093788
ADH5_chr4_99065978_99093788	0/0	g0017	3	0	2	0	1	0	ADH5	chr4	99065978	99093788
ADH5_chr4_99065978_99093788	0/0	g0018	2	2	0	0	0	0	ADH5	chr4	99065978	99093788
ADH5_chr4_99065978_99093788	0/0	g0019	2	0	2	0	0	0	ADH5	chr4	99065978	99093788
ADH5_chr4_99065978_99093788	0/0	g0020	2	0	2	0	0	0	ADH5	chr4	99065978	99093788
ADH5_chr4_99065978_99093788	0/0	g0021	2	0	2	0	0	0	ADH5	chr4	99065978	99093788
ADH5_chr4_99065978_99093788	0/0	g0022	2	0	2	0	0	0	ADH5	chr4	99065978	99093788
ADH5_chr4_99065978_99093788	0/0	g0023	2	0	0	0	0	2	ADH5	chr4	99065978	99093788
ADH5_chr4_99065978_99093788	0/0	g0024	2	0	0	2	0	0	ADH5	chr4	99065978	99093788
ADH5_chr4_99065978_99093788	0/0	g0025	2	0	1	0	0	1	ADH5	chr4	99065978	99093788
ADH5_chr4_99065978_99093788	0/0	g0026	2	1	0	0	0	1	ADH5	chr4	99065978	99093788
ADH5_chr4_99065978_99093788	0/0	g0027	2	0	0	2	0	0	ADH5	chr4	99065978	99093788
ADH5_chr4_99065978_99093788	0/0	g0028	2	0	0	0	0	2	ADH5	chr4	99065978	99093788
ADH5_chr4_99065978_99093788	0/0	g0029	2	0	0	0	0	2	ADH5	chr4	99065978	99093788
ADH5_chr4_99065978_99093788	0/0	g0030	2	0	0	2	0	0	ADH5	chr4	99065978	99093788
ADH5_chr4_99065978_99093788	0/0	g0031	2	2	0	0	0	0	ADH5	chr4	99065978	99093788
ADH5_chr4_99065978_99093788	0/0	g0032	2	2	0	0	0	0	ADH5	chr4	99065978	99093788
ADH5_chr4_99065978_99093788	0/0	g0033	2	2	0	0	0	0	ADH5	chr4	99065978	99093788
ADH5_chr4_99065978_99093788	0/0	g0034	2	2	0	0	0	0	ADH5	chr4	99065978	99093788
ADH5_chr4_99065978_99093788	0/0	g0035	2	0	2	0	0	0	ADH5	chr4	99065978	99093788
ADH5_chr4_99065978_99093788	0/0	g0036	2	0	2	0	0	0	ADH5	chr4	99065978	99093788
ADH5_chr4_99065978_99093788	0/0	g0037	2	0	0	2	0	0	ADH5	chr4	99065978	99093788
ADH5_chr4_99065978_99093788	0/0	g0038	2	0	0	0	0	2	ADH5	chr4	99065978	99093788
ADH5_chr4_99065978_99093788	0/0	g0039	2	0	2	0	0	0	ADH5	chr4	99065978	99093788