JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ADH7_chr4_99407263_99440342	0/0	g0190	1	0	0	1	0	0	ADH7	chr4	99407263	99440342
ADH7_chr4_99407263_99440342	0/0	g0191	1	0	1	0	0	0	ADH7	chr4	99407263	99440342
ADH7_chr4_99407263_99440342	0/0	g0192	1	0	0	1	0	0	ADH7	chr4	99407263	99440342
ADH7_chr4_99407263_99440342	0/0	g0193	1	0	1	0	0	0	ADH7	chr4	99407263	99440342
ADH7_chr4_99407263_99440342	0/0	g0194	1	0	0	1	0	0	ADH7	chr4	99407263	99440342
ADH7_chr4_99407263_99440342	0/0	g0195	1	0	0	1	0	0	ADH7	chr4	99407263	99440342
ADH7_chr4_99407263_99440342	0/0	g0196	1	0	1	0	0	0	ADH7	chr4	99407263	99440342
ADH7_chr4_99407263_99440342	0/0	g0197	1	0	0	1	0	0	ADH7	chr4	99407263	99440342
ADH7_chr4_99407263_99440342	0/0	g0198	1	0	0	1	0	0	ADH7	chr4	99407263	99440342
ADH7_chr4_99407263_99440342	0/0	g0199	1	0	0	0	0	1	ADH7	chr4	99407263	99440342
ADH7_chr4_99407263_99440342	0/0	g0200	1	0	1	0	0	0	ADH7	chr4	99407263	99440342
ADH7_chr4_99407263_99440342	0/0	g0201	1	0	0	1	0	0	ADH7	chr4	99407263	99440342
ADH7_chr4_99407263_99440342	0/1	g0202	1	0	0	0	0	0	ADH7	chr4	99407263	99440342
ADH7_chr4_99407263_99440342	0/0	g0203	1	0	0	1	0	0	ADH7	chr4	99407263	99440342
ADH7_chr4_99407263_99440342	0/0	g0204	1	0	0	1	0	0	ADH7	chr4	99407263	99440342
ADH7_chr4_99407263_99440342	0/0	g0205	1	0	0	0	1	0	ADH7	chr4	99407263	99440342
ADH7_chr4_99407263_99440342	0/0	g0206	1	0	0	1	0	0	ADH7	chr4	99407263	99440342
ADH7_chr4_99407263_99440342	0/0	g0207	1	0	0	1	0	0	ADH7	chr4	99407263	99440342
ADH7_chr4_99407263_99440342	0/0	g0208	1	0	0	0	0	1	ADH7	chr4	99407263	99440342
ADH7_chr4_99407263_99440342	0/0	g0209	1	0	0	1	0	0	ADH7	chr4	99407263	99440342
ADH7_chr4_99407263_99440342	0/0	g0210	1	0	0	1	0	0	ADH7	chr4	99407263	99440342
ADH7_chr4_99407263_99440342	0/0	g0211	1	1	0	0	0	0	ADH7	chr4	99407263	99440342
ADH7_chr4_99407263_99440342	0/0	g0212	1	0	0	0	0	1	ADH7	chr4	99407263	99440342
ADH7_chr4_99407263_99440342	0/0	g0213	1	1	0	0	0	0	ADH7	chr4	99407263	99440342
ADH7_chr4_99407263_99440342	0/0	g0214	1	0	1	0	0	0	ADH7	chr4	99407263	99440342
ADH7_chr4_99407263_99440342	0/0	g0215	1	0	1	0	0	0	ADH7	chr4	99407263	99440342
ADH7_chr4_99407263_99440342	0/0	g0216	1	0	1	0	0	0	ADH7	chr4	99407263	99440342
ADH7_chr4_99407263_99440342	0/0	g0217	1	0	0	1	0	0	ADH7	chr4	99407263	99440342
ADH7_chr4_99407263_99440342	0/0	g0218	1	0	1	0	0	0	ADH7	chr4	99407263	99440342
ADH7_chr4_99407263_99440342	0/0	g0219	1	1	0	0	0	0	ADH7	chr4	99407263	99440342
ADH7_chr4_99407263_99440342	0/0	g0220	1	0	0	1	0	0	ADH7	chr4	99407263	99440342
ADHFE1_chr8_66427504_66473907	0/0	g0001	7	0	0	7	0	0	ADHFE1	chr8	66427504	66473907
ADHFE1_chr8_66427504_66473907	0/0	g0002	6	0	2	3	0	1	ADHFE1	chr8	66427504	66473907
ADHFE1_chr8_66427504_66473907	0/0	g0003	5	0	0	5	0	0	ADHFE1	chr8	66427504	66473907
ADHFE1_chr8_66427504_66473907	0/0	g0004	4	0	2	2	0	0	ADHFE1	chr8	66427504	66473907
ADHFE1_chr8_66427504_66473907	0/0	g0005	4	0	0	4	0	0	ADHFE1	chr8	66427504	66473907
ADHFE1_chr8_66427504_66473907	0/0	g0006	4	0	0	3	1	0	ADHFE1	chr8	66427504	66473907
ADHFE1_chr8_66427504_66473907	0/0	g0007	4	0	0	2	0	2	ADHFE1	chr8	66427504	66473907
ADHFE1_chr8_66427504_66473907	0/0	g0008	4	0	4	0	0	0	ADHFE1	chr8	66427504	66473907
ADHFE1_chr8_66427504_66473907	0/0	g0009	3	0	0	3	0	0	ADHFE1	chr8	66427504	66473907
ADHFE1_chr8_66427504_66473907	0/0	g0010	3	0	0	2	0	1	ADHFE1	chr8	66427504	66473907
ADHFE1_chr8_66427504_66473907	0/0	g0011	3	1	0	2	0	0	ADHFE1	chr8	66427504	66473907
ADHFE1_chr8_66427504_66473907	0/0	g0012	3	0	2	1	0	0	ADHFE1	chr8	66427504	66473907
ADHFE1_chr8_66427504_66473907	0/0	g0013	3	0	3	0	0	0	ADHFE1	chr8	66427504	66473907
ADHFE1_chr8_66427504_66473907	0/0	g0014	3	0	0	3	0	0	ADHFE1	chr8	66427504	66473907
ADHFE1_chr8_66427504_66473907	0/0	g0015	2	0	1	0	1	0	ADHFE1	chr8	66427504	66473907
ADHFE1_chr8_66427504_66473907	0/0	g0016	2	0	1	0	0	1	ADHFE1	chr8	66427504	66473907
ADHFE1_chr8_66427504_66473907	0/1	g0017	2	0	0	0	0	1	ADHFE1	chr8	66427504	66473907
ADHFE1_chr8_66427504_66473907	0/0	g0018	2	2	0	0	0	0	ADHFE1	chr8	66427504	66473907
ADHFE1_chr8_66427504_66473907	0/0	g0019	2	2	0	0	0	0	ADHFE1	chr8	66427504	66473907