JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ADORA1_chr1_203122726_203172405	0/0	g0337	1	1	0	0	0	0	ADORA1	chr1	203122726	203172405
ADORA1_chr1_203122726_203172405	0/0	g0338	1	0	0	1	0	0	ADORA1	chr1	203122726	203172405
ADORA1_chr1_203122726_203172405	0/0	g0339	1	0	0	1	0	0	ADORA1	chr1	203122726	203172405
ADORA1_chr1_203122726_203172405	0/0	g0340	1	0	1	0	0	0	ADORA1	chr1	203122726	203172405
ADORA1_chr1_203122726_203172405	0/0	g0341	1	1	0	0	0	0	ADORA1	chr1	203122726	203172405
ADORA1_chr1_203122726_203172405	0/0	g0342	1	1	0	0	0	0	ADORA1	chr1	203122726	203172405
ADORA1_chr1_203122726_203172405	0/0	g0343	1	1	0	0	0	0	ADORA1	chr1	203122726	203172405
ADORA1_chr1_203122726_203172405	0/0	g0344	1	0	1	0	0	0	ADORA1	chr1	203122726	203172405
ADORA1_chr1_203122726_203172405	0/0	g0345	1	0	1	0	0	0	ADORA1	chr1	203122726	203172405
ADORA1_chr1_203122726_203172405	0/0	g0346	1	1	0	0	0	0	ADORA1	chr1	203122726	203172405
ADORA1_chr1_203122726_203172405	0/0	g0347	1	1	0	0	0	0	ADORA1	chr1	203122726	203172405
ADORA1_chr1_203122726_203172405	0/0	g0348	1	0	0	1	0	0	ADORA1	chr1	203122726	203172405
ADORA2A_chr22_24422599_24447357	0/0	g0001	28	0	11	7	7	3	ADORA2A	chr22	24422599	24447357
ADORA2A_chr22_24422599_24447357	0/0	g0002	22	2	3	15	0	2	ADORA2A	chr22	24422599	24447357
ADORA2A_chr22_24422599_24447357	0/0	g0003	18	12	4	0	2	0	ADORA2A	chr22	24422599	24447357
ADORA2A_chr22_24422599_24447357	0/0	g0004	18	0	3	12	1	2	ADORA2A	chr22	24422599	24447357
ADORA2A_chr22_24422599_24447357	0/0	g0005	15	3	0	10	0	2	ADORA2A	chr22	24422599	24447357
ADORA2A_chr22_24422599_24447357	0/0	g0006	12	2	2	5	2	1	ADORA2A	chr22	24422599	24447357
ADORA2A_chr22_24422599_24447357	0/0	g0007	11	0	1	8	0	2	ADORA2A	chr22	24422599	24447357
ADORA2A_chr22_24422599_24447357	0/0	g0008	10	0	0	8	0	2	ADORA2A	chr22	24422599	24447357
ADORA2A_chr22_24422599_24447357	0/0	g0009	9	1	1	6	0	1	ADORA2A	chr22	24422599	24447357
ADORA2A_chr22_24422599_24447357	0/0	g0010	8	0	0	7	0	1	ADORA2A	chr22	24422599	24447357
ADORA2A_chr22_24422599_24447357	0/0	g0011	8	8	0	0	0	0	ADORA2A	chr22	24422599	24447357
ADORA2A_chr22_24422599_24447357	0/0	g0012	8	0	0	6	1	1	ADORA2A	chr22	24422599	24447357
ADORA2A_chr22_24422599_24447357	0/0	g0013	7	3	0	1	0	3	ADORA2A	chr22	24422599	24447357
ADORA2A_chr22_24422599_24447357	0/0	g0014	6	0	0	6	0	0	ADORA2A	chr22	24422599	24447357
ADORA2A_chr22_24422599_24447357	0/0	g0015	6	0	0	6	0	0	ADORA2A	chr22	24422599	24447357
ADORA2A_chr22_24422599_24447357	0/0	g0016	5	5	0	0	0	0	ADORA2A	chr22	24422599	24447357
ADORA2A_chr22_24422599_24447357	0/0	g0017	5	0	0	5	0	0	ADORA2A	chr22	24422599	24447357
ADORA2A_chr22_24422599_24447357	0/0	g0018	4	4	0	0	0	0	ADORA2A	chr22	24422599	24447357
ADORA2A_chr22_24422599_24447357	1/0	g0019	4	0	0	2	0	1	ADORA2A	chr22	24422599	24447357
ADORA2A_chr22_24422599_24447357	0/0	g0020	4	0	4	0	0	0	ADORA2A	chr22	24422599	24447357
ADORA2A_chr22_24422599_24447357	0/0	g0021	4	0	2	2	0	0	ADORA2A	chr22	24422599	24447357
ADORA2A_chr22_24422599_24447357	0/0	g0022	4	1	2	0	1	0	ADORA2A	chr22	24422599	24447357
ADORA2A_chr22_24422599_24447357	0/0	g0023	4	3	1	0	0	0	ADORA2A	chr22	24422599	24447357
ADORA2A_chr22_24422599_24447357	0/0	g0024	3	0	0	3	0	0	ADORA2A	chr22	24422599	24447357
ADORA2A_chr22_24422599_24447357	0/0	g0025	3	3	0	0	0	0	ADORA2A	chr22	24422599	24447357
ADORA2A_chr22_24422599_24447357	0/0	g0026	3	3	0	0	0	0	ADORA2A	chr22	24422599	24447357
ADORA2A_chr22_24422599_24447357	0/0	g0027	3	0	0	3	0	0	ADORA2A	chr22	24422599	24447357
ADORA2A_chr22_24422599_24447357	0/0	g0028	3	0	0	3	0	0	ADORA2A	chr22	24422599	24447357
ADORA2A_chr22_24422599_24447357	0/0	g0029	3	1	0	2	0	0	ADORA2A	chr22	24422599	24447357
ADORA2A_chr22_24422599_24447357	0/0	g0030	3	0	1	0	1	1	ADORA2A	chr22	24422599	24447357
ADORA2A_chr22_24422599_24447357	0/0	g0031	3	0	0	3	0	0	ADORA2A	chr22	24422599	24447357
ADORA2A_chr22_24422599_24447357	0/0	g0032	3	0	0	3	0	0	ADORA2A	chr22	24422599	24447357
ADORA2A_chr22_24422599_24447357	0/0	g0033	3	0	3	0	0	0	ADORA2A	chr22	24422599	24447357
ADORA2A_chr22_24422599_24447357	0/0	g0034	3	3	0	0	0	0	ADORA2A	chr22	24422599	24447357
ADORA2A_chr22_24422599_24447357	0/0	g0035	2	0	0	2	0	0	ADORA2A	chr22	24422599	24447357
ADORA2A_chr22_24422599_24447357	0/0	g0036	2	0	2	0	0	0	ADORA2A	chr22	24422599	24447357
ADORA2A_chr22_24422599_24447357	0/0	g0037	2	2	0	0	0	0	ADORA2A	chr22	24422599	24447357
ADORA2A_chr22_24422599_24447357	0/0	g0038	2	1	1	0	0	0	ADORA2A	chr22	24422599	24447357