JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ADPRHL1_chr13_113394611_113458488	0/0	g0247	1	1	0	0	0	0	ADPRHL1	chr13	113394611	113458488
ADPRHL1_chr13_113394611_113458488	0/0	g0248	1	1	0	0	0	0	ADPRHL1	chr13	113394611	113458488
ADPRHL1_chr13_113394611_113458488	0/0	g0249	1	1	0	0	0	0	ADPRHL1	chr13	113394611	113458488
ADPRHL1_chr13_113394611_113458488	0/0	g0250	1	1	0	0	0	0	ADPRHL1	chr13	113394611	113458488
ADPRHL1_chr13_113394611_113458488	0/0	g0251	1	1	0	0	0	0	ADPRHL1	chr13	113394611	113458488
ADPRHL1_chr13_113394611_113458488	0/0	g0252	1	1	0	0	0	0	ADPRHL1	chr13	113394611	113458488
ADPRHL1_chr13_113394611_113458488	0/0	g0253	1	1	0	0	0	0	ADPRHL1	chr13	113394611	113458488
ADPRHL1_chr13_113394611_113458488	0/0	g0254	1	1	0	0	0	0	ADPRHL1	chr13	113394611	113458488
ADPRHL1_chr13_113394611_113458488	0/0	g0255	1	0	1	0	0	0	ADPRHL1	chr13	113394611	113458488
ADPRHL1_chr13_113394611_113458488	0/0	g0256	1	0	1	0	0	0	ADPRHL1	chr13	113394611	113458488
ADPRHL1_chr13_113394611_113458488	0/0	g0257	1	1	0	0	0	0	ADPRHL1	chr13	113394611	113458488
ADPRHL1_chr13_113394611_113458488	0/0	g0258	1	1	0	0	0	0	ADPRHL1	chr13	113394611	113458488
ADPRHL1_chr13_113394611_113458488	0/0	g0259	1	0	0	1	0	0	ADPRHL1	chr13	113394611	113458488
ADPRHL1_chr13_113394611_113458488	0/0	g0260	1	1	0	0	0	0	ADPRHL1	chr13	113394611	113458488
ADPRHL1_chr13_113394611_113458488	0/0	g0261	1	0	0	1	0	0	ADPRHL1	chr13	113394611	113458488
ADPRHL1_chr13_113394611_113458488	0/0	g0262	1	1	0	0	0	0	ADPRHL1	chr13	113394611	113458488
ADPRH_chr3_119574492_119594945	1/1	g0001	107	17	27	48	2	11	ADPRH	chr3	119574492	119594945
ADPRH_chr3_119574492_119594945	0/0	g0002	93	23	13	52	2	3	ADPRH	chr3	119574492	119594945
ADPRH_chr3_119574492_119594945	0/0	g0003	49	5	5	29	2	8	ADPRH	chr3	119574492	119594945
ADPRH_chr3_119574492_119594945	0/0	g0004	47	0	1	42	0	4	ADPRH	chr3	119574492	119594945
ADPRH_chr3_119574492_119594945	0/0	g0005	11	2	5	1	1	2	ADPRH	chr3	119574492	119594945
ADPRH_chr3_119574492_119594945	0/0	g0006	10	8	2	0	0	0	ADPRH	chr3	119574492	119594945
ADPRH_chr3_119574492_119594945	0/0	g0007	7	1	1	4	0	1	ADPRH	chr3	119574492	119594945
ADPRH_chr3_119574492_119594945	0/0	g0008	6	1	0	0	3	2	ADPRH	chr3	119574492	119594945
ADPRH_chr3_119574492_119594945	0/0	g0009	6	2	0	4	0	0	ADPRH	chr3	119574492	119594945
ADPRH_chr3_119574492_119594945	0/0	g0010	6	6	0	0	0	0	ADPRH	chr3	119574492	119594945
ADPRH_chr3_119574492_119594945	0/0	g0011	5	0	0	4	0	1	ADPRH	chr3	119574492	119594945
ADPRH_chr3_119574492_119594945	0/0	g0012	5	2	1	1	0	1	ADPRH	chr3	119574492	119594945
ADPRH_chr3_119574492_119594945	0/0	g0013	5	0	2	3	0	0	ADPRH	chr3	119574492	119594945
ADPRH_chr3_119574492_119594945	0/0	g0014	5	0	1	4	0	0	ADPRH	chr3	119574492	119594945
ADPRH_chr3_119574492_119594945	0/0	g0015	4	0	0	0	3	1	ADPRH	chr3	119574492	119594945
ADPRH_chr3_119574492_119594945	0/0	g0016	4	0	0	0	0	4	ADPRH	chr3	119574492	119594945
ADPRH_chr3_119574492_119594945	0/0	g0017	4	3	1	0	0	0	ADPRH	chr3	119574492	119594945
ADPRH_chr3_119574492_119594945	0/0	g0018	4	0	0	4	0	0	ADPRH	chr3	119574492	119594945
ADPRH_chr3_119574492_119594945	0/0	g0019	3	2	0	1	0	0	ADPRH	chr3	119574492	119594945
ADPRH_chr3_119574492_119594945	0/0	g0020	3	0	1	0	0	2	ADPRH	chr3	119574492	119594945
ADPRH_chr3_119574492_119594945	0/0	g0021	2	2	0	0	0	0	ADPRH	chr3	119574492	119594945
ADPRH_chr3_119574492_119594945	0/0	g0022	2	0	0	2	0	0	ADPRH	chr3	119574492	119594945
ADPRH_chr3_119574492_119594945	0/0	g0023	2	0	1	1	0	0	ADPRH	chr3	119574492	119594945
ADPRH_chr3_119574492_119594945	0/0	g0024	2	0	1	0	1	0	ADPRH	chr3	119574492	119594945
ADPRH_chr3_119574492_119594945	0/0	g0025	2	0	0	0	0	2	ADPRH	chr3	119574492	119594945
ADPRH_chr3_119574492_119594945	0/0	g0026	2	2	0	0	0	0	ADPRH	chr3	119574492	119594945
ADPRH_chr3_119574492_119594945	0/0	g0027	2	2	0	0	0	0	ADPRH	chr3	119574492	119594945
ADPRH_chr3_119574492_119594945	0/0	g0028	2	1	1	0	0	0	ADPRH	chr3	119574492	119594945
ADPRH_chr3_119574492_119594945	0/0	g0029	2	1	0	1	0	0	ADPRH	chr3	119574492	119594945
ADPRH_chr3_119574492_119594945	0/0	g0030	2	2	0	0	0	0	ADPRH	chr3	119574492	119594945
ADPRH_chr3_119574492_119594945	0/0	g0031	1	0	1	0	0	0	ADPRH	chr3	119574492	119594945
ADPRH_chr3_119574492_119594945	0/0	g0032	1	1	0	0	0	0	ADPRH	chr3	119574492	119594945
ADPRH_chr3_119574492_119594945	0/0	g0033	1	0	1	0	0	0	ADPRH	chr3	119574492	119594945
ADPRH_chr3_119574492_119594945	0/0	g0034	1	0	0	1	0	0	ADPRH	chr3	119574492	119594945