JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ADPRS_chr1_36083892_36098932	0/0	g0006	25	0	2	22	0	1	ADPRS	chr1	36083892	36098932
ADPRS_chr1_36083892_36098932	0/0	g0007	15	0	1	11	0	3	ADPRS	chr1	36083892	36098932
ADPRS_chr1_36083892_36098932	0/0	g0008	14	0	0	14	0	0	ADPRS	chr1	36083892	36098932
ADPRS_chr1_36083892_36098932	1/0	g0009	13	2	5	0	2	3	ADPRS	chr1	36083892	36098932
ADPRS_chr1_36083892_36098932	0/0	g0010	8	1	0	7	0	0	ADPRS	chr1	36083892	36098932
ADPRS_chr1_36083892_36098932	0/0	g0011	7	5	0	2	0	0	ADPRS	chr1	36083892	36098932
ADPRS_chr1_36083892_36098932	0/0	g0012	5	1	0	3	0	1	ADPRS	chr1	36083892	36098932
ADPRS_chr1_36083892_36098932	0/0	g0013	4	0	0	4	0	0	ADPRS	chr1	36083892	36098932
ADPRS_chr1_36083892_36098932	0/0	g0014	4	0	1	3	0	0	ADPRS	chr1	36083892	36098932
ADPRS_chr1_36083892_36098932	0/0	g0015	3	3	0	0	0	0	ADPRS	chr1	36083892	36098932
ADPRS_chr1_36083892_36098932	0/0	g0016	3	3	0	0	0	0	ADPRS	chr1	36083892	36098932
ADPRS_chr1_36083892_36098932	0/0	g0017	3	2	0	0	0	1	ADPRS	chr1	36083892	36098932
ADPRS_chr1_36083892_36098932	0/0	g0018	2	0	0	2	0	0	ADPRS	chr1	36083892	36098932
ADPRS_chr1_36083892_36098932	0/0	g0019	2	0	0	2	0	0	ADPRS	chr1	36083892	36098932
ADPRS_chr1_36083892_36098932	0/0	g0020	2	2	0	0	0	0	ADPRS	chr1	36083892	36098932
ADPRS_chr1_36083892_36098932	0/0	g0021	2	0	2	0	0	0	ADPRS	chr1	36083892	36098932
ADPRS_chr1_36083892_36098932	0/0	g0022	2	1	0	0	0	1	ADPRS	chr1	36083892	36098932
ADPRS_chr1_36083892_36098932	0/0	g0023	2	0	0	0	0	2	ADPRS	chr1	36083892	36098932
ADPRS_chr1_36083892_36098932	0/0	g0024	2	0	0	2	0	0	ADPRS	chr1	36083892	36098932
ADPRS_chr1_36083892_36098932	0/0	g0025	2	2	0	0	0	0	ADPRS	chr1	36083892	36098932
ADPRS_chr1_36083892_36098932	0/0	g0026	2	1	1	0	0	0	ADPRS	chr1	36083892	36098932
ADPRS_chr1_36083892_36098932	0/0	g0027	2	0	0	2	0	0	ADPRS	chr1	36083892	36098932
ADPRS_chr1_36083892_36098932	0/0	g0028	2	0	0	2	0	0	ADPRS	chr1	36083892	36098932
ADPRS_chr1_36083892_36098932	0/0	g0029	2	0	0	2	0	0	ADPRS	chr1	36083892	36098932
ADPRS_chr1_36083892_36098932	0/0	g0030	1	0	0	1	0	0	ADPRS	chr1	36083892	36098932
ADPRS_chr1_36083892_36098932	0/0	g0031	1	1	0	0	0	0	ADPRS	chr1	36083892	36098932
ADPRS_chr1_36083892_36098932	0/0	g0032	1	1	0	0	0	0	ADPRS	chr1	36083892	36098932
ADPRS_chr1_36083892_36098932	0/0	g0033	1	1	0	0	0	0	ADPRS	chr1	36083892	36098932
ADPRS_chr1_36083892_36098932	0/0	g0034	1	0	0	1	0	0	ADPRS	chr1	36083892	36098932
ADPRS_chr1_36083892_36098932	0/0	g0035	1	0	0	1	0	0	ADPRS	chr1	36083892	36098932
ADPRS_chr1_36083892_36098932	0/0	g0036	1	1	0	0	0	0	ADPRS	chr1	36083892	36098932
ADPRS_chr1_36083892_36098932	0/0	g0037	1	1	0	0	0	0	ADPRS	chr1	36083892	36098932
ADPRS_chr1_36083892_36098932	0/0	g0038	1	0	0	0	0	1	ADPRS	chr1	36083892	36098932
ADPRS_chr1_36083892_36098932	0/0	g0039	1	0	1	0	0	0	ADPRS	chr1	36083892	36098932
ADPRS_chr1_36083892_36098932	0/0	g0040	1	0	0	0	0	1	ADPRS	chr1	36083892	36098932
ADPRS_chr1_36083892_36098932	0/0	g0041	1	0	1	0	0	0	ADPRS	chr1	36083892	36098932
ADPRS_chr1_36083892_36098932	0/0	g0042	1	0	1	0	0	0	ADPRS	chr1	36083892	36098932
ADPRS_chr1_36083892_36098932	0/0	g0043	1	0	1	0	0	0	ADPRS	chr1	36083892	36098932
ADPRS_chr1_36083892_36098932	0/0	g0044	1	1	0	0	0	0	ADPRS	chr1	36083892	36098932
ADPRS_chr1_36083892_36098932	0/0	g0045	1	1	0	0	0	0	ADPRS	chr1	36083892	36098932
ADPRS_chr1_36083892_36098932	0/0	g0046	1	0	0	0	0	1	ADPRS	chr1	36083892	36098932
ADPRS_chr1_36083892_36098932	0/0	g0047	1	0	0	1	0	0	ADPRS	chr1	36083892	36098932
ADPRS_chr1_36083892_36098932	0/0	g0048	1	0	0	1	0	0	ADPRS	chr1	36083892	36098932
ADPRS_chr1_36083892_36098932	0/0	g0049	1	1	0	0	0	0	ADPRS	chr1	36083892	36098932
ADPRS_chr1_36083892_36098932	0/0	g0050	1	0	0	1	0	0	ADPRS	chr1	36083892	36098932
ADPRS_chr1_36083892_36098932	0/0	g0051	1	0	0	1	0	0	ADPRS	chr1	36083892	36098932
ADPRS_chr1_36083892_36098932	0/0	g0052	1	1	0	0	0	0	ADPRS	chr1	36083892	36098932
ADPRS_chr1_36083892_36098932	0/0	g0053	1	1	0	0	0	0	ADPRS	chr1	36083892	36098932
ADPRS_chr1_36083892_36098932	0/0	g0054	1	0	0	1	0	0	ADPRS	chr1	36083892	36098932
ADRA1A_chr8_26763809_26872278	0/0	g0001	3	0	3	0	0	0	ADRA1A	chr8	26763809	26872278