JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ADRA1D_chr20_4215630_4254287	0/0	g0406	1	0	0	1	0	0	ADRA1D	chr20	4215630	4254287
ADRA1D_chr20_4215630_4254287	0/0	g0407	1	0	0	1	0	0	ADRA1D	chr20	4215630	4254287
ADRA1D_chr20_4215630_4254287	0/0	g0408	1	0	0	0	0	1	ADRA1D	chr20	4215630	4254287
ADRA1D_chr20_4215630_4254287	0/0	g0409	1	0	0	0	0	1	ADRA1D	chr20	4215630	4254287
ADRA1D_chr20_4215630_4254287	0/0	g0410	1	0	0	0	0	1	ADRA1D	chr20	4215630	4254287
ADRA1D_chr20_4215630_4254287	0/0	g0411	1	0	0	1	0	0	ADRA1D	chr20	4215630	4254287
ADRA1D_chr20_4215630_4254287	0/0	g0412	1	0	0	0	0	1	ADRA1D	chr20	4215630	4254287
ADRA2A_chr10_111072029_111085907	1/1	g0000	432	88	74	212	10	46	ADRA2A	chr10	111072029	111085907
ADRA2B_chr2_96107876_96121571	1/1	g0000	390	88	78	174	8	40	ADRA2B	chr2	96107876	96121571
ADRA2C_chr4_3761385_3773526	1/1	g0000	420	98	82	174	18	46	ADRA2C	chr4	3761385	3773526
ADRB1_chr10_114038866_114051904	1/1	g0000	394	92	80	164	18	38	ADRB1	chr10	114038866	114051904
ADRB2_chr5_148821611_148833623	1/1	g0000	454	98	78	212	18	46	ADRB2	chr5	148821611	148833623
ADRB3_chr8_37957990_37971599	1/0	g0001	236	37	45	116	6	31	ADRB3	chr8	37957990	37971599
ADRB3_chr8_37957990_37971599	0/0	g0002	36	0	6	21	0	9	ADRB3	chr8	37957990	37971599
ADRB3_chr8_37957990_37971599	0/0	g0003	12	8	0	4	0	0	ADRB3	chr8	37957990	37971599
ADRB3_chr8_37957990_37971599	0/0	g0004	9	0	2	7	0	0	ADRB3	chr8	37957990	37971599
ADRB3_chr8_37957990_37971599	0/0	g0005	8	8	0	0	0	0	ADRB3	chr8	37957990	37971599
ADRB3_chr8_37957990_37971599	0/0	g0006	8	8	0	0	0	0	ADRB3	chr8	37957990	37971599
ADRB3_chr8_37957990_37971599	0/0	g0007	5	5	0	0	0	0	ADRB3	chr8	37957990	37971599
ADRB3_chr8_37957990_37971599	0/0	g0008	5	5	0	0	0	0	ADRB3	chr8	37957990	37971599
ADRB3_chr8_37957990_37971599	0/0	g0009	4	0	0	4	0	0	ADRB3	chr8	37957990	37971599
ADRB3_chr8_37957990_37971599	0/0	g0010	3	0	0	3	0	0	ADRB3	chr8	37957990	37971599
ADRB3_chr8_37957990_37971599	0/0	g0011	3	0	0	2	0	1	ADRB3	chr8	37957990	37971599
ADRB3_chr8_37957990_37971599	0/0	g0012	3	3	0	0	0	0	ADRB3	chr8	37957990	37971599
ADRB3_chr8_37957990_37971599	0/1	g0013	3	0	2	0	0	0	ADRB3	chr8	37957990	37971599
ADRB3_chr8_37957990_37971599	0/0	g0014	3	3	0	0	0	0	ADRB3	chr8	37957990	37971599
ADRB3_chr8_37957990_37971599	0/0	g0015	2	0	0	2	0	0	ADRB3	chr8	37957990	37971599
ADRB3_chr8_37957990_37971599	0/0	g0016	2	0	0	2	0	0	ADRB3	chr8	37957990	37971599
ADRB3_chr8_37957990_37971599	0/0	g0017	2	1	1	0	0	0	ADRB3	chr8	37957990	37971599
ADRB3_chr8_37957990_37971599	0/0	g0018	2	0	0	1	0	1	ADRB3	chr8	37957990	37971599
ADRB3_chr8_37957990_37971599	0/0	g0019	1	0	1	0	0	0	ADRB3	chr8	37957990	37971599
ADRB3_chr8_37957990_37971599	0/0	g0020	1	0	0	1	0	0	ADRB3	chr8	37957990	37971599
ADRB3_chr8_37957990_37971599	0/0	g0021	1	0	0	0	1	0	ADRB3	chr8	37957990	37971599
ADRB3_chr8_37957990_37971599	0/0	g0022	1	0	0	1	0	0	ADRB3	chr8	37957990	37971599
ADRB3_chr8_37957990_37971599	0/0	g0023	1	1	0	0	0	0	ADRB3	chr8	37957990	37971599
ADRB3_chr8_37957990_37971599	0/0	g0024	1	0	0	1	0	0	ADRB3	chr8	37957990	37971599
ADRB3_chr8_37957990_37971599	0/0	g0025	1	1	0	0	0	0	ADRB3	chr8	37957990	37971599
ADRB3_chr8_37957990_37971599	0/0	g0026	1	1	0	0	0	0	ADRB3	chr8	37957990	37971599
ADRB3_chr8_37957990_37971599	0/0	g0027	1	0	0	0	1	0	ADRB3	chr8	37957990	37971599
ADRB3_chr8_37957990_37971599	0/0	g0028	1	1	0	0	0	0	ADRB3	chr8	37957990	37971599
ADRB3_chr8_37957990_37971599	0/0	g0029	1	0	0	1	0	0	ADRB3	chr8	37957990	37971599
ADRB3_chr8_37957990_37971599	0/0	g0030	1	0	0	1	0	0	ADRB3	chr8	37957990	37971599
ADRB3_chr8_37957990_37971599	0/0	g0031	1	1	0	0	0	0	ADRB3	chr8	37957990	37971599
ADRB3_chr8_37957990_37971599	0/0	g0032	1	0	1	0	0	0	ADRB3	chr8	37957990	37971599
ADRB3_chr8_37957990_37971599	0/0	g0033	1	0	0	1	0	0	ADRB3	chr8	37957990	37971599
ADRB3_chr8_37957990_37971599	0/0	g0034	1	1	0	0	0	0	ADRB3	chr8	37957990	37971599
ADRM1_chr20_62297997_62313862	0/0	g0001	57	2	9	36	5	5	ADRM1	chr20	62297997	62313862
ADRM1_chr20_62297997_62313862	0/0	g0002	57	16	8	21	5	7	ADRM1	chr20	62297997	62313862
ADRM1_chr20_62297997_62313862	0/1	g0003	48	6	9	23	1	8	ADRM1	chr20	62297997	62313862
ADRM1_chr20_62297997_62313862	0/0	g0004	34	0	5	18	4	7	ADRM1	chr20	62297997	62313862