JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ADTRP_chr6_11708523_11783803	0/0	g0385	1	0	0	0	0	1	ADTRP	chr6	11708523	11783803
ADTRP_chr6_11708523_11783803	0/0	g0386	1	0	0	1	0	0	ADTRP	chr6	11708523	11783803
ADTRP_chr6_11708523_11783803	0/0	g0387	1	0	1	0	0	0	ADTRP	chr6	11708523	11783803
ADTRP_chr6_11708523_11783803	0/0	g0388	1	0	1	0	0	0	ADTRP	chr6	11708523	11783803
ADTRP_chr6_11708523_11783803	0/0	g0389	1	1	0	0	0	0	ADTRP	chr6	11708523	11783803
ADTRP_chr6_11708523_11783803	0/0	g0390	1	0	0	0	0	1	ADTRP	chr6	11708523	11783803
ADTRP_chr6_11708523_11783803	0/0	g0391	1	0	0	0	1	0	ADTRP	chr6	11708523	11783803
ADTRP_chr6_11708523_11783803	0/0	g0392	1	0	0	1	0	0	ADTRP	chr6	11708523	11783803
ADTRP_chr6_11708523_11783803	0/0	g0393	1	0	1	0	0	0	ADTRP	chr6	11708523	11783803
ADTRP_chr6_11708523_11783803	0/0	g0394	1	1	0	0	0	0	ADTRP	chr6	11708523	11783803
ADTRP_chr6_11708523_11783803	0/0	g0395	1	1	0	0	0	0	ADTRP	chr6	11708523	11783803
ADTRP_chr6_11708523_11783803	0/0	g0396	1	1	0	0	0	0	ADTRP	chr6	11708523	11783803
AEBP1_chr7_44099345_44119560	0/0	g0001	92	23	16	48	1	4	AEBP1	chr7	44099345	44119560
AEBP1_chr7_44099345_44119560	0/0	g0002	89	19	12	41	3	14	AEBP1	chr7	44099345	44119560
AEBP1_chr7_44099345_44119560	0/0	g0003	55	1	15	32	5	2	AEBP1	chr7	44099345	44119560
AEBP1_chr7_44099345_44119560	0/0	g0004	32	0	1	24	2	5	AEBP1	chr7	44099345	44119560
AEBP1_chr7_44099345_44119560	0/0	g0005	28	9	2	9	0	8	AEBP1	chr7	44099345	44119560
AEBP1_chr7_44099345_44119560	0/0	g0006	9	0	0	9	0	0	AEBP1	chr7	44099345	44119560
AEBP1_chr7_44099345_44119560	0/0	g0007	8	7	1	0	0	0	AEBP1	chr7	44099345	44119560
AEBP1_chr7_44099345_44119560	0/0	g0008	8	0	0	8	0	0	AEBP1	chr7	44099345	44119560
AEBP1_chr7_44099345_44119560	0/0	g0009	5	0	4	0	1	0	AEBP1	chr7	44099345	44119560
AEBP1_chr7_44099345_44119560	0/0	g0010	5	5	0	0	0	0	AEBP1	chr7	44099345	44119560
AEBP1_chr7_44099345_44119560	0/0	g0011	5	0	2	1	0	2	AEBP1	chr7	44099345	44119560
AEBP1_chr7_44099345_44119560	0/0	g0012	4	3	1	0	0	0	AEBP1	chr7	44099345	44119560
AEBP1_chr7_44099345_44119560	0/0	g0013	4	4	0	0	0	0	AEBP1	chr7	44099345	44119560
AEBP1_chr7_44099345_44119560	0/0	g0014	4	0	2	0	0	2	AEBP1	chr7	44099345	44119560
AEBP1_chr7_44099345_44119560	0/0	g0015	4	0	4	0	0	0	AEBP1	chr7	44099345	44119560
AEBP1_chr7_44099345_44119560	0/0	g0016	4	4	0	0	0	0	AEBP1	chr7	44099345	44119560
AEBP1_chr7_44099345_44119560	0/0	g0017	3	3	0	0	0	0	AEBP1	chr7	44099345	44119560
AEBP1_chr7_44099345_44119560	0/0	g0018	3	0	0	0	3	0	AEBP1	chr7	44099345	44119560
AEBP1_chr7_44099345_44119560	0/0	g0019	3	0	2	0	1	0	AEBP1	chr7	44099345	44119560
AEBP1_chr7_44099345_44119560	0/0	g0020	3	0	0	3	0	0	AEBP1	chr7	44099345	44119560
AEBP1_chr7_44099345_44119560	0/0	g0021	3	0	0	0	1	2	AEBP1	chr7	44099345	44119560
AEBP1_chr7_44099345_44119560	0/0	g0022	3	0	2	1	0	0	AEBP1	chr7	44099345	44119560
AEBP1_chr7_44099345_44119560	0/0	g0023	2	2	0	0	0	0	AEBP1	chr7	44099345	44119560
AEBP1_chr7_44099345_44119560	0/0	g0024	2	2	0	0	0	0	AEBP1	chr7	44099345	44119560
AEBP1_chr7_44099345_44119560	0/0	g0025	2	2	0	0	0	0	AEBP1	chr7	44099345	44119560
AEBP1_chr7_44099345_44119560	0/0	g0026	2	0	2	0	0	0	AEBP1	chr7	44099345	44119560
AEBP1_chr7_44099345_44119560	0/0	g0027	2	2	0	0	0	0	AEBP1	chr7	44099345	44119560
AEBP1_chr7_44099345_44119560	0/0	g0028	2	0	0	0	1	1	AEBP1	chr7	44099345	44119560
AEBP1_chr7_44099345_44119560	0/0	g0029	2	0	0	2	0	0	AEBP1	chr7	44099345	44119560
AEBP1_chr7_44099345_44119560	0/0	g0030	2	2	0	0	0	0	AEBP1	chr7	44099345	44119560
AEBP1_chr7_44099345_44119560	0/0	g0031	2	0	1	0	0	1	AEBP1	chr7	44099345	44119560
AEBP1_chr7_44099345_44119560	0/0	g0032	2	0	0	2	0	0	AEBP1	chr7	44099345	44119560
AEBP1_chr7_44099345_44119560	0/0	g0033	1	0	0	1	0	0	AEBP1	chr7	44099345	44119560
AEBP1_chr7_44099345_44119560	0/0	g0034	1	1	0	0	0	0	AEBP1	chr7	44099345	44119560
AEBP1_chr7_44099345_44119560	0/0	g0035	1	1	0	0	0	0	AEBP1	chr7	44099345	44119560
AEBP1_chr7_44099345_44119560	0/0	g0036	1	0	0	1	0	0	AEBP1	chr7	44099345	44119560
AEBP1_chr7_44099345_44119560	0/0	g0037	1	0	0	1	0	0	AEBP1	chr7	44099345	44119560
AEBP1_chr7_44099345_44119560	0/0	g0038	1	1	0	0	0	0	AEBP1	chr7	44099345	44119560