JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
AEBP2_chr12_19434492_19527227	0/0	g0375	1	0	0	1	0	0	AEBP2	chr12	19434492	19527227
AEBP2_chr12_19434492_19527227	0/0	g0376	1	0	1	0	0	0	AEBP2	chr12	19434492	19527227
AEBP2_chr12_19434492_19527227	0/0	g0377	1	0	0	1	0	0	AEBP2	chr12	19434492	19527227
AEBP2_chr12_19434492_19527227	0/0	g0378	1	0	1	0	0	0	AEBP2	chr12	19434492	19527227
AEBP2_chr12_19434492_19527227	0/0	g0379	1	0	1	0	0	0	AEBP2	chr12	19434492	19527227
AEBP2_chr12_19434492_19527227	0/0	g0380	1	0	0	1	0	0	AEBP2	chr12	19434492	19527227
AEBP2_chr12_19434492_19527227	0/0	g0381	1	0	0	0	0	1	AEBP2	chr12	19434492	19527227
AEBP2_chr12_19434492_19527227	0/0	g0382	1	0	0	1	0	0	AEBP2	chr12	19434492	19527227
AEBP2_chr12_19434492_19527227	0/0	g0383	1	0	0	0	1	0	AEBP2	chr12	19434492	19527227
AEBP2_chr12_19434492_19527227	0/0	g0384	1	0	0	1	0	0	AEBP2	chr12	19434492	19527227
AEBP2_chr12_19434492_19527227	0/0	g0385	1	1	0	0	0	0	AEBP2	chr12	19434492	19527227
AEBP2_chr12_19434492_19527227	0/0	g0386	1	1	0	0	0	0	AEBP2	chr12	19434492	19527227
AEBP2_chr12_19434492_19527227	0/0	g0387	1	0	0	0	0	1	AEBP2	chr12	19434492	19527227
AEBP2_chr12_19434492_19527227	0/0	g0388	1	0	0	0	0	1	AEBP2	chr12	19434492	19527227
AEBP2_chr12_19434492_19527227	0/0	g0389	1	0	0	0	1	0	AEBP2	chr12	19434492	19527227
AEBP2_chr12_19434492_19527227	0/0	g0390	1	0	0	1	0	0	AEBP2	chr12	19434492	19527227
AEBP2_chr12_19434492_19527227	0/0	g0391	1	1	0	0	0	0	AEBP2	chr12	19434492	19527227
AEBP2_chr12_19434492_19527227	0/0	g0392	1	1	0	0	0	0	AEBP2	chr12	19434492	19527227
AEBP2_chr12_19434492_19527227	0/0	g0393	1	1	0	0	0	0	AEBP2	chr12	19434492	19527227
AEBP2_chr12_19434492_19527227	0/0	g0394	1	1	0	0	0	0	AEBP2	chr12	19434492	19527227
AEBP2_chr12_19434492_19527227	0/0	g0395	1	1	0	0	0	0	AEBP2	chr12	19434492	19527227
AEBP2_chr12_19434492_19527227	0/0	g0396	1	1	0	0	0	0	AEBP2	chr12	19434492	19527227
AEBP2_chr12_19434492_19527227	0/0	g0397	1	0	0	1	0	0	AEBP2	chr12	19434492	19527227
AEBP2_chr12_19434492_19527227	0/0	g0398	1	0	1	0	0	0	AEBP2	chr12	19434492	19527227
AEBP2_chr12_19434492_19527227	0/0	g0399	1	0	1	0	0	0	AEBP2	chr12	19434492	19527227
AEBP2_chr12_19434492_19527227	0/0	g0400	1	1	0	0	0	0	AEBP2	chr12	19434492	19527227
AEN_chr15_88616340_88637281	0/0	g0001	113	2	20	74	2	15	AEN	chr15	88616340	88637281
AEN_chr15_88616340_88637281	1/0	g0002	86	21	17	42	0	5	AEN	chr15	88616340	88637281
AEN_chr15_88616340_88637281	0/0	g0003	80	11	7	47	4	11	AEN	chr15	88616340	88637281
AEN_chr15_88616340_88637281	0/0	g0004	8	8	0	0	0	0	AEN	chr15	88616340	88637281
AEN_chr15_88616340_88637281	0/0	g0005	7	1	3	0	2	1	AEN	chr15	88616340	88637281
AEN_chr15_88616340_88637281	0/0	g0006	7	0	0	7	0	0	AEN	chr15	88616340	88637281
AEN_chr15_88616340_88637281	0/0	g0007	6	0	0	4	1	1	AEN	chr15	88616340	88637281
AEN_chr15_88616340_88637281	0/0	g0008	6	5	1	0	0	0	AEN	chr15	88616340	88637281
AEN_chr15_88616340_88637281	0/1	g0009	5	0	3	0	1	0	AEN	chr15	88616340	88637281
AEN_chr15_88616340_88637281	0/0	g0010	4	4	0	0	0	0	AEN	chr15	88616340	88637281
AEN_chr15_88616340_88637281	0/0	g0011	4	0	0	0	0	4	AEN	chr15	88616340	88637281
AEN_chr15_88616340_88637281	0/0	g0012	4	0	0	4	0	0	AEN	chr15	88616340	88637281
AEN_chr15_88616340_88637281	0/0	g0013	4	4	0	0	0	0	AEN	chr15	88616340	88637281
AEN_chr15_88616340_88637281	0/0	g0014	4	0	3	1	0	0	AEN	chr15	88616340	88637281
AEN_chr15_88616340_88637281	0/0	g0015	3	3	0	0	0	0	AEN	chr15	88616340	88637281
AEN_chr15_88616340_88637281	0/0	g0016	3	2	1	0	0	0	AEN	chr15	88616340	88637281
AEN_chr15_88616340_88637281	0/0	g0017	3	3	0	0	0	0	AEN	chr15	88616340	88637281
AEN_chr15_88616340_88637281	0/0	g0018	3	0	3	0	0	0	AEN	chr15	88616340	88637281
AEN_chr15_88616340_88637281	0/0	g0019	3	1	0	2	0	0	AEN	chr15	88616340	88637281
AEN_chr15_88616340_88637281	0/0	g0020	3	0	2	0	1	0	AEN	chr15	88616340	88637281
AEN_chr15_88616340_88637281	0/0	g0021	3	2	1	0	0	0	AEN	chr15	88616340	88637281
AEN_chr15_88616340_88637281	0/0	g0022	2	0	0	1	0	1	AEN	chr15	88616340	88637281
AEN_chr15_88616340_88637281	0/0	g0023	2	2	0	0	0	0	AEN	chr15	88616340	88637281
AEN_chr15_88616340_88637281	0/0	g0024	2	0	2	0	0	0	AEN	chr15	88616340	88637281