JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
AHSA1_chr14_77453093_77474472	0/0	g0110	1	1	0	0	0	0	AHSA1	chr14	77453093	77474472
AHSA1_chr14_77453093_77474472	0/0	g0111	1	1	0	0	0	0	AHSA1	chr14	77453093	77474472
AHSA1_chr14_77453093_77474472	0/0	g0112	1	0	0	0	1	0	AHSA1	chr14	77453093	77474472
AHSA1_chr14_77453093_77474472	0/0	g0113	1	0	0	0	0	1	AHSA1	chr14	77453093	77474472
AHSA1_chr14_77453093_77474472	0/0	g0114	1	0	1	0	0	0	AHSA1	chr14	77453093	77474472
AHSA1_chr14_77453093_77474472	0/0	g0115	1	0	0	0	1	0	AHSA1	chr14	77453093	77474472
AHSA1_chr14_77453093_77474472	0/0	g0116	1	0	0	1	0	0	AHSA1	chr14	77453093	77474472
AHSA1_chr14_77453093_77474472	0/0	g0117	1	0	0	1	0	0	AHSA1	chr14	77453093	77474472
AHSA1_chr14_77453093_77474472	0/0	g0118	1	1	0	0	0	0	AHSA1	chr14	77453093	77474472
AHSA1_chr14_77453093_77474472	0/0	g0119	1	0	0	0	0	1	AHSA1	chr14	77453093	77474472
AHSA1_chr14_77453093_77474472	0/0	g0120	1	0	0	0	0	1	AHSA1	chr14	77453093	77474472
AHSA1_chr14_77453093_77474472	0/0	g0121	1	0	0	0	0	1	AHSA1	chr14	77453093	77474472
AHSA1_chr14_77453093_77474472	0/0	g0122	1	0	0	0	0	1	AHSA1	chr14	77453093	77474472
AHSA1_chr14_77453093_77474472	0/0	g0123	1	0	0	0	0	1	AHSA1	chr14	77453093	77474472
AHSA1_chr14_77453093_77474472	0/0	g0124	1	0	0	0	0	1	AHSA1	chr14	77453093	77474472
AHSA1_chr14_77453093_77474472	0/0	g0125	1	1	0	0	0	0	AHSA1	chr14	77453093	77474472
AHSA1_chr14_77453093_77474472	0/0	g0126	1	0	1	0	0	0	AHSA1	chr14	77453093	77474472
AHSA1_chr14_77453093_77474472	0/0	g0127	1	0	1	0	0	0	AHSA1	chr14	77453093	77474472
AHSA1_chr14_77453093_77474472	0/0	g0128	1	1	0	0	0	0	AHSA1	chr14	77453093	77474472
AHSA1_chr14_77453093_77474472	0/0	g0129	1	0	0	0	0	1	AHSA1	chr14	77453093	77474472
AHSA1_chr14_77453093_77474472	0/0	g0130	1	1	0	0	0	0	AHSA1	chr14	77453093	77474472
AHSA1_chr14_77453093_77474472	0/0	g0131	1	1	0	0	0	0	AHSA1	chr14	77453093	77474472
AHSA1_chr14_77453093_77474472	0/0	g0132	1	1	0	0	0	0	AHSA1	chr14	77453093	77474472
AHSA1_chr14_77453093_77474472	0/0	g0133	1	1	0	0	0	0	AHSA1	chr14	77453093	77474472
AHSA1_chr14_77453093_77474472	0/0	g0134	1	1	0	0	0	0	AHSA1	chr14	77453093	77474472
AHSA1_chr14_77453093_77474472	0/0	g0135	1	1	0	0	0	0	AHSA1	chr14	77453093	77474472
AHSA1_chr14_77453093_77474472	0/0	g0136	1	1	0	0	0	0	AHSA1	chr14	77453093	77474472
AHSA1_chr14_77453093_77474472	0/0	g0137	1	1	0	0	0	0	AHSA1	chr14	77453093	77474472
AHSA1_chr14_77453093_77474472	0/0	g0138	1	1	0	0	0	0	AHSA1	chr14	77453093	77474472
AHSA1_chr14_77453093_77474472	0/0	g0139	1	0	0	0	1	0	AHSA1	chr14	77453093	77474472
AHSA1_chr14_77453093_77474472	0/0	g0140	1	0	0	1	0	0	AHSA1	chr14	77453093	77474472
AHSA1_chr14_77453093_77474472	0/0	g0141	1	0	0	1	0	0	AHSA1	chr14	77453093	77474472
AHSA1_chr14_77453093_77474472	0/0	g0142	1	0	0	1	0	0	AHSA1	chr14	77453093	77474472
AHSA1_chr14_77453093_77474472	0/0	g0143	1	0	0	1	0	0	AHSA1	chr14	77453093	77474472
AHSA1_chr14_77453093_77474472	0/0	g0144	1	0	1	0	0	0	AHSA1	chr14	77453093	77474472
AHSA1_chr14_77453093_77474472	0/0	g0145	1	0	1	0	0	0	AHSA1	chr14	77453093	77474472
AHSA1_chr14_77453093_77474472	0/0	g0146	1	0	0	1	0	0	AHSA1	chr14	77453093	77474472
AHSA1_chr14_77453093_77474472	0/0	g0147	1	0	1	0	0	0	AHSA1	chr14	77453093	77474472
AHSA1_chr14_77453093_77474472	0/0	g0148	1	0	1	0	0	0	AHSA1	chr14	77453093	77474472
AHSA1_chr14_77453093_77474472	0/0	g0149	1	0	1	0	0	0	AHSA1	chr14	77453093	77474472
AHSA1_chr14_77453093_77474472	0/0	g0150	1	1	0	0	0	0	AHSA1	chr14	77453093	77474472
AHSA1_chr14_77453093_77474472	0/0	g0151	1	1	0	0	0	0	AHSA1	chr14	77453093	77474472
AHSG_chr3_186608060_186626318	0/0	g0001	121	2	22	73	6	18	AHSG	chr3	186608060	186626318
AHSG_chr3_186608060_186626318	0/0	g0002	84	25	11	33	4	11	AHSG	chr3	186608060	186626318
AHSG_chr3_186608060_186626318	1/1	g0003	56	4	15	27	3	5	AHSG	chr3	186608060	186626318
AHSG_chr3_186608060_186626318	0/0	g0004	27	4	8	10	1	4	AHSG	chr3	186608060	186626318
AHSG_chr3_186608060_186626318	0/0	g0005	13	0	2	10	0	1	AHSG	chr3	186608060	186626318
AHSG_chr3_186608060_186626318	0/0	g0006	13	0	5	8	0	0	AHSG	chr3	186608060	186626318
AHSG_chr3_186608060_186626318	0/0	g0007	12	6	2	0	2	2	AHSG	chr3	186608060	186626318
AHSG_chr3_186608060_186626318	0/0	g0008	9	8	1	0	0	0	AHSG	chr3	186608060	186626318