Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
A2M_chr12_9062708_9120919	0/0	g0252	1	0	0	1	0	0	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	0/0	g0253	1	0	0	1	0	0	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	0/0	g0254	1	0	0	1	0	0	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	0/0	g0255	1	0	0	1	0	0	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	0/0	g0256	1	0	0	1	0	0	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	0/0	g0257	1	0	0	1	0	0	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	0/0	g0258	1	0	0	0	0	1	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	0/0	g0259	1	0	0	0	0	1	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	0/0	g0260	1	0	0	0	0	1	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	0/0	g0261	1	0	0	1	0	0	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	0/0	g0262	1	0	0	1	0	0	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	0/0	g0263	1	0	0	0	0	1	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	0/0	g0264	1	0	0	1	0	0	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	0/0	g0265	1	0	0	1	0	0	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	0/0	g0266	1	0	0	1	0	0	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	0/0	g0267	1	0	0	1	0	0	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	0/0	g0268	1	0	0	1	0	0	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	0/0	g0269	1	0	0	1	0	0	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	0/0	g0270	1	0	0	1	0	0	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	0/0	g0271	1	0	1	0	0	0	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	0/0	g0272	1	0	0	0	1	0	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	0/0	g0273	1	0	0	1	0	0	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	0/0	g0274	1	0	0	1	0	0	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	0/0	g0275	1	0	0	1	0	0	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	0/0	g0276	1	1	0	0	0	0	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	0/0	g0277	1	0	0	1	0	0	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	0/0	g0278	1	1	0	0	0	0	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	0/0	g0001	26	0	3	20	0	3	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	0/0	g0002	23	1	1	13	3	5	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	0/1	g0003	21	0	7	9	2	2	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	0/0	g0004	19	0	0	18	0	1	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	0/0	g0005	8	0	1	6	0	1	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	0/0	g0006	6	0	0	6	0	0	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	0/0	g0007	6	6	0	0	0	0	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	0/0	g0008	5	0	1	4	0	0	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	0/0	g0009	4	0	1	0	0	3	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	0/0	g0010	4	0	1	2	0	1	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	0/0	g0011	4	0	0	4	0	0	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	0/0	g0012	3	2	1	0	0	0	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	0/0	g0013	3	0	0	2	0	1	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	0/0	g0014	3	0	0	1	0	2	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	0/0	g0015	3	1	0	2	0	0	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	0/0	g0016	3	0	1	2	0	0	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	0/0	g0017	3	0	1	2	0	0	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	0/0	g0018	3	0	0	0	1	2	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	0/0	g0019	3	3	0	0	0	0	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	0/0	g0020	3	0	3	0	0	0	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	0/0	g0021	3	0	3	0	0	0	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	0/0	g0022	2	0	0	2	0	0	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	0/0	g0023	2	2	0	0	0	0	A3GALT2	chr1	33301766	33326098