JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
AICDA_chr12_8597170_8617859	0/0	g0284	1	0	1	0	0	0	AICDA	chr12	8597170	8617859
AICDA_chr12_8597170_8617859	0/0	g0285	1	1	0	0	0	0	AICDA	chr12	8597170	8617859
AICDA_chr12_8597170_8617859	0/0	g0286	1	1	0	0	0	0	AICDA	chr12	8597170	8617859
AICDA_chr12_8597170_8617859	0/0	g0287	1	0	0	0	0	1	AICDA	chr12	8597170	8617859
AICDA_chr12_8597170_8617859	0/0	g0288	1	1	0	0	0	0	AICDA	chr12	8597170	8617859
AICDA_chr12_8597170_8617859	0/0	g0289	1	1	0	0	0	0	AICDA	chr12	8597170	8617859
AICDA_chr12_8597170_8617859	0/0	g0290	1	1	0	0	0	0	AICDA	chr12	8597170	8617859
AICDA_chr12_8597170_8617859	0/0	g0291	1	1	0	0	0	0	AICDA	chr12	8597170	8617859
AICDA_chr12_8597170_8617859	0/0	g0292	1	1	0	0	0	0	AICDA	chr12	8597170	8617859
AICDA_chr12_8597170_8617859	0/0	g0293	1	1	0	0	0	0	AICDA	chr12	8597170	8617859
AIDA_chr1_222663013_222717491	0/0	g0001	20	0	1	19	0	0	AIDA	chr1	222663013	222717491
AIDA_chr1_222663013_222717491	0/0	g0002	5	0	0	4	1	0	AIDA	chr1	222663013	222717491
AIDA_chr1_222663013_222717491	0/0	g0003	5	1	2	2	0	0	AIDA	chr1	222663013	222717491
AIDA_chr1_222663013_222717491	0/0	g0004	5	0	0	5	0	0	AIDA	chr1	222663013	222717491
AIDA_chr1_222663013_222717491	0/0	g0005	3	3	0	0	0	0	AIDA	chr1	222663013	222717491
AIDA_chr1_222663013_222717491	0/0	g0006	3	2	1	0	0	0	AIDA	chr1	222663013	222717491
AIDA_chr1_222663013_222717491	0/0	g0007	3	0	0	3	0	0	AIDA	chr1	222663013	222717491
AIDA_chr1_222663013_222717491	0/0	g0008	3	0	3	0	0	0	AIDA	chr1	222663013	222717491
AIDA_chr1_222663013_222717491	0/0	g0009	3	0	1	1	0	1	AIDA	chr1	222663013	222717491
AIDA_chr1_222663013_222717491	0/0	g0010	2	2	0	0	0	0	AIDA	chr1	222663013	222717491
AIDA_chr1_222663013_222717491	0/0	g0011	2	2	0	0	0	0	AIDA	chr1	222663013	222717491
AIDA_chr1_222663013_222717491	0/0	g0012	2	2	0	0	0	0	AIDA	chr1	222663013	222717491
AIDA_chr1_222663013_222717491	0/0	g0013	2	0	0	0	0	2	AIDA	chr1	222663013	222717491
AIDA_chr1_222663013_222717491	0/0	g0014	2	1	0	1	0	0	AIDA	chr1	222663013	222717491
AIDA_chr1_222663013_222717491	0/0	g0015	2	1	0	1	0	0	AIDA	chr1	222663013	222717491
AIDA_chr1_222663013_222717491	0/0	g0016	2	0	0	0	2	0	AIDA	chr1	222663013	222717491
AIDA_chr1_222663013_222717491	0/0	g0017	2	2	0	0	0	0	AIDA	chr1	222663013	222717491
AIDA_chr1_222663013_222717491	0/0	g0018	2	0	0	2	0	0	AIDA	chr1	222663013	222717491
AIDA_chr1_222663013_222717491	0/0	g0019	2	2	0	0	0	0	AIDA	chr1	222663013	222717491
AIDA_chr1_222663013_222717491	0/0	g0020	2	0	1	0	0	1	AIDA	chr1	222663013	222717491
AIDA_chr1_222663013_222717491	0/0	g0021	2	2	0	0	0	0	AIDA	chr1	222663013	222717491
AIDA_chr1_222663013_222717491	0/0	g0022	2	0	0	2	0	0	AIDA	chr1	222663013	222717491
AIDA_chr1_222663013_222717491	0/0	g0023	2	0	1	1	0	0	AIDA	chr1	222663013	222717491
AIDA_chr1_222663013_222717491	0/0	g0024	2	0	0	1	0	1	AIDA	chr1	222663013	222717491
AIDA_chr1_222663013_222717491	0/0	g0025	2	2	0	0	0	0	AIDA	chr1	222663013	222717491
AIDA_chr1_222663013_222717491	0/0	g0026	2	2	0	0	0	0	AIDA	chr1	222663013	222717491
AIDA_chr1_222663013_222717491	0/0	g0027	2	0	0	2	0	0	AIDA	chr1	222663013	222717491
AIDA_chr1_222663013_222717491	0/0	g0028	2	0	2	0	0	0	AIDA	chr1	222663013	222717491
AIDA_chr1_222663013_222717491	0/0	g0029	2	0	1	1	0	0	AIDA	chr1	222663013	222717491
AIDA_chr1_222663013_222717491	0/0	g0030	2	0	0	2	0	0	AIDA	chr1	222663013	222717491
AIDA_chr1_222663013_222717491	0/0	g0031	2	0	0	2	0	0	AIDA	chr1	222663013	222717491
AIDA_chr1_222663013_222717491	0/0	g0032	2	0	2	0	0	0	AIDA	chr1	222663013	222717491
AIDA_chr1_222663013_222717491	0/0	g0033	1	0	0	0	0	1	AIDA	chr1	222663013	222717491
AIDA_chr1_222663013_222717491	0/0	g0034	1	1	0	0	0	0	AIDA	chr1	222663013	222717491
AIDA_chr1_222663013_222717491	0/0	g0035	1	1	0	0	0	0	AIDA	chr1	222663013	222717491
AIDA_chr1_222663013_222717491	0/0	g0036	1	1	0	0	0	0	AIDA	chr1	222663013	222717491
AIDA_chr1_222663013_222717491	0/0	g0037	1	1	0	0	0	0	AIDA	chr1	222663013	222717491
AIDA_chr1_222663013_222717491	0/0	g0038	1	1	0	0	0	0	AIDA	chr1	222663013	222717491
AIDA_chr1_222663013_222717491	0/0	g0039	1	1	0	0	0	0	AIDA	chr1	222663013	222717491
AIDA_chr1_222663013_222717491	0/0	g0040	1	1	0	0	0	0	AIDA	chr1	222663013	222717491