JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
AIF1L_chr9_131091531_131128144	0/0	g0287	1	0	0	1	0	0	AIF1L	chr9	131091531	131128144
AIF1L_chr9_131091531_131128144	0/0	g0288	1	0	0	1	0	0	AIF1L	chr9	131091531	131128144
AIF1L_chr9_131091531_131128144	0/0	g0289	1	0	0	0	0	1	AIF1L	chr9	131091531	131128144
AIF1L_chr9_131091531_131128144	0/0	g0290	1	0	0	1	0	0	AIF1L	chr9	131091531	131128144
AIF1L_chr9_131091531_131128144	0/0	g0291	1	0	1	0	0	0	AIF1L	chr9	131091531	131128144
AIF1L_chr9_131091531_131128144	0/0	g0292	1	0	1	0	0	0	AIF1L	chr9	131091531	131128144
AIF1L_chr9_131091531_131128144	0/0	g0293	1	0	0	1	0	0	AIF1L	chr9	131091531	131128144
AIF1L_chr9_131091531_131128144	0/0	g0294	1	0	0	1	0	0	AIF1L	chr9	131091531	131128144
AIF1L_chr9_131091531_131128144	0/0	g0295	1	0	0	1	0	0	AIF1L	chr9	131091531	131128144
AIF1L_chr9_131091531_131128144	0/0	g0296	1	0	1	0	0	0	AIF1L	chr9	131091531	131128144
AIF1L_chr9_131091531_131128144	0/0	g0297	1	0	0	1	0	0	AIF1L	chr9	131091531	131128144
AIF1L_chr9_131091531_131128144	0/0	g0298	1	0	0	1	0	0	AIF1L	chr9	131091531	131128144
AIF1L_chr9_131091531_131128144	0/0	g0299	1	0	0	1	0	0	AIF1L	chr9	131091531	131128144
AIF1L_chr9_131091531_131128144	0/0	g0300	1	0	0	1	0	0	AIF1L	chr9	131091531	131128144
AIF1L_chr9_131091531_131128144	0/0	g0301	1	0	0	1	0	0	AIF1L	chr9	131091531	131128144
AIF1L_chr9_131091531_131128144	0/0	g0302	1	0	0	1	0	0	AIF1L	chr9	131091531	131128144
AIF1L_chr9_131091531_131128144	0/0	g0303	1	0	0	0	0	1	AIF1L	chr9	131091531	131128144
AIF1L_chr9_131091531_131128144	0/0	g0304	1	0	0	1	0	0	AIF1L	chr9	131091531	131128144
AIF1L_chr9_131091531_131128144	0/0	g0305	1	0	0	1	0	0	AIF1L	chr9	131091531	131128144
AIF1L_chr9_131091531_131128144	0/0	g0306	1	0	0	1	0	0	AIF1L	chr9	131091531	131128144
AIF1L_chr9_131091531_131128144	0/0	g0307	1	0	0	1	0	0	AIF1L	chr9	131091531	131128144
AIF1L_chr9_131091531_131128144	0/0	g0308	1	0	0	1	0	0	AIF1L	chr9	131091531	131128144
AIF1L_chr9_131091531_131128144	0/0	g0309	1	0	0	1	0	0	AIF1L	chr9	131091531	131128144
AIF1L_chr9_131091531_131128144	0/0	g0310	1	0	0	1	0	0	AIF1L	chr9	131091531	131128144
AIF1L_chr9_131091531_131128144	0/0	g0311	1	0	0	0	0	1	AIF1L	chr9	131091531	131128144
AIF1L_chr9_131091531_131128144	0/0	g0312	1	0	0	0	0	1	AIF1L	chr9	131091531	131128144
AIF1L_chr9_131091531_131128144	0/0	g0313	1	0	1	0	0	0	AIF1L	chr9	131091531	131128144
AIF1L_chr9_131091531_131128144	0/0	g0314	1	1	0	0	0	0	AIF1L	chr9	131091531	131128144
AIF1L_chr9_131091531_131128144	0/0	g0315	1	0	1	0	0	0	AIF1L	chr9	131091531	131128144
AIF1L_chr9_131091531_131128144	0/0	g0316	1	0	1	0	0	0	AIF1L	chr9	131091531	131128144
AIF1L_chr9_131091531_131128144	0/0	g0317	1	0	1	0	0	0	AIF1L	chr9	131091531	131128144
AIF1_chr6_31610234_31622015	0/1	g0001	127	1	24	80	7	14	AIF1	chr6	31610234	31622015
AIF1_chr6_31610234_31622015	0/0	g0002	119	54	18	26	6	15	AIF1	chr6	31610234	31622015
AIF1_chr6_31610234_31622015	0/0	g0003	64	7	15	38	1	3	AIF1	chr6	31610234	31622015
AIF1_chr6_31610234_31622015	0/0	g0004	45	24	14	2	3	2	AIF1	chr6	31610234	31622015
AIF1_chr6_31610234_31622015	0/0	g0005	41	1	4	28	1	7	AIF1	chr6	31610234	31622015
AIF1_chr6_31610234_31622015	0/0	g0006	26	6	2	12	0	6	AIF1	chr6	31610234	31622015
AIF1_chr6_31610234_31622015	0/0	g0007	5	0	0	5	0	0	AIF1	chr6	31610234	31622015
AIF1_chr6_31610234_31622015	0/0	g0008	4	0	0	4	0	0	AIF1	chr6	31610234	31622015
AIF1_chr6_31610234_31622015	0/0	g0009	2	0	2	0	0	0	AIF1	chr6	31610234	31622015
AIF1_chr6_31610234_31622015	0/0	g0010	1	0	0	1	0	0	AIF1	chr6	31610234	31622015
AIF1_chr6_31610234_31622015	0/0	g0011	1	0	0	0	0	1	AIF1	chr6	31610234	31622015
AIF1_chr6_31610234_31622015	0/0	g0012	1	0	1	0	0	0	AIF1	chr6	31610234	31622015
AIF1_chr6_31610234_31622015	0/0	g0013	1	1	0	0	0	0	AIF1	chr6	31610234	31622015
AIFM1_chrX_130124362_130170841	0/0	g0001	4	0	1	2	0	1	AIFM1	chrX	130124362	130170841
AIFM1_chrX_130124362_130170841	0/0	g0002	3	3	0	0	0	0	AIFM1	chrX	130124362	130170841
AIFM1_chrX_130124362_130170841	0/0	g0003	2	2	0	0	0	0	AIFM1	chrX	130124362	130170841
AIFM1_chrX_130124362_130170841	0/0	g0004	2	0	0	2	0	0	AIFM1	chrX	130124362	130170841
AIFM1_chrX_130124362_130170841	0/0	g0005	2	0	0	1	0	1	AIFM1	chrX	130124362	130170841
AIFM1_chrX_130124362_130170841	0/0	g0006	2	0	0	2	0	0	AIFM1	chrX	130124362	130170841