JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
AIM2_chr1_159057484_159081766	0/0	g0142	1	0	0	1	0	0	AIM2	chr1	159057484	159081766
AIM2_chr1_159057484_159081766	0/0	g0143	1	0	0	0	0	1	AIM2	chr1	159057484	159081766
AIM2_chr1_159057484_159081766	0/0	g0144	1	1	0	0	0	0	AIM2	chr1	159057484	159081766
AIM2_chr1_159057484_159081766	0/0	g0145	1	1	0	0	0	0	AIM2	chr1	159057484	159081766
AIM2_chr1_159057484_159081766	0/0	g0146	1	1	0	0	0	0	AIM2	chr1	159057484	159081766
AIM2_chr1_159057484_159081766	0/0	g0147	1	1	0	0	0	0	AIM2	chr1	159057484	159081766
AIM2_chr1_159057484_159081766	0/0	g0148	1	1	0	0	0	0	AIM2	chr1	159057484	159081766
AIM2_chr1_159057484_159081766	0/0	g0149	1	1	0	0	0	0	AIM2	chr1	159057484	159081766
AIM2_chr1_159057484_159081766	0/0	g0150	1	1	0	0	0	0	AIM2	chr1	159057484	159081766
AIM2_chr1_159057484_159081766	0/0	g0151	1	1	0	0	0	0	AIM2	chr1	159057484	159081766
AIM2_chr1_159057484_159081766	0/0	g0152	1	0	0	0	0	1	AIM2	chr1	159057484	159081766
AIM2_chr1_159057484_159081766	0/0	g0153	1	0	0	0	0	1	AIM2	chr1	159057484	159081766
AIM2_chr1_159057484_159081766	0/0	g0154	1	1	0	0	0	0	AIM2	chr1	159057484	159081766
AIM2_chr1_159057484_159081766	0/0	g0155	1	0	0	1	0	0	AIM2	chr1	159057484	159081766
AIM2_chr1_159057484_159081766	0/0	g0156	1	0	0	1	0	0	AIM2	chr1	159057484	159081766
AIM2_chr1_159057484_159081766	0/0	g0157	1	0	0	0	0	1	AIM2	chr1	159057484	159081766
AIM2_chr1_159057484_159081766	0/0	g0158	1	0	0	1	0	0	AIM2	chr1	159057484	159081766
AIM2_chr1_159057484_159081766	0/0	g0159	1	0	0	0	0	1	AIM2	chr1	159057484	159081766
AIM2_chr1_159057484_159081766	0/0	g0160	1	0	0	1	0	0	AIM2	chr1	159057484	159081766
AIM2_chr1_159057484_159081766	0/0	g0161	1	0	0	1	0	0	AIM2	chr1	159057484	159081766
AIM2_chr1_159057484_159081766	0/0	g0162	1	0	0	1	0	0	AIM2	chr1	159057484	159081766
AIM2_chr1_159057484_159081766	0/0	g0163	1	0	0	1	0	0	AIM2	chr1	159057484	159081766
AIM2_chr1_159057484_159081766	0/0	g0164	1	1	0	0	0	0	AIM2	chr1	159057484	159081766
AIM2_chr1_159057484_159081766	0/0	g0165	1	1	0	0	0	0	AIM2	chr1	159057484	159081766
AIM2_chr1_159057484_159081766	0/0	g0166	1	0	0	0	0	1	AIM2	chr1	159057484	159081766
AIM2_chr1_159057484_159081766	0/0	g0167	1	0	0	1	0	0	AIM2	chr1	159057484	159081766
AIM2_chr1_159057484_159081766	0/0	g0168	1	1	0	0	0	0	AIM2	chr1	159057484	159081766
AIM2_chr1_159057484_159081766	0/0	g0169	1	0	0	1	0	0	AIM2	chr1	159057484	159081766
AIM2_chr1_159057484_159081766	0/0	g0170	1	1	0	0	0	0	AIM2	chr1	159057484	159081766
AIMP1_chr4_106311550_106354456	0/0	g0001	16	1	3	10	1	1	AIMP1	chr4	106311550	106354456
AIMP1_chr4_106311550_106354456	0/1	g0002	15	0	1	8	3	2	AIMP1	chr4	106311550	106354456
AIMP1_chr4_106311550_106354456	0/0	g0003	13	0	4	6	0	3	AIMP1	chr4	106311550	106354456
AIMP1_chr4_106311550_106354456	0/0	g0004	8	0	4	4	0	0	AIMP1	chr4	106311550	106354456
AIMP1_chr4_106311550_106354456	0/0	g0005	5	1	1	3	0	0	AIMP1	chr4	106311550	106354456
AIMP1_chr4_106311550_106354456	0/0	g0006	5	0	0	5	0	0	AIMP1	chr4	106311550	106354456
AIMP1_chr4_106311550_106354456	0/0	g0007	5	0	2	3	0	0	AIMP1	chr4	106311550	106354456
AIMP1_chr4_106311550_106354456	0/0	g0008	4	0	0	4	0	0	AIMP1	chr4	106311550	106354456
AIMP1_chr4_106311550_106354456	0/0	g0009	4	0	0	4	0	0	AIMP1	chr4	106311550	106354456
AIMP1_chr4_106311550_106354456	0/0	g0010	4	0	0	4	0	0	AIMP1	chr4	106311550	106354456
AIMP1_chr4_106311550_106354456	0/0	g0011	4	0	0	2	0	2	AIMP1	chr4	106311550	106354456
AIMP1_chr4_106311550_106354456	0/0	g0012	4	0	0	4	0	0	AIMP1	chr4	106311550	106354456
AIMP1_chr4_106311550_106354456	0/0	g0013	4	0	0	4	0	0	AIMP1	chr4	106311550	106354456
AIMP1_chr4_106311550_106354456	0/0	g0014	4	0	4	0	0	0	AIMP1	chr4	106311550	106354456
AIMP1_chr4_106311550_106354456	0/0	g0015	4	0	0	4	0	0	AIMP1	chr4	106311550	106354456
AIMP1_chr4_106311550_106354456	0/0	g0016	3	0	0	3	0	0	AIMP1	chr4	106311550	106354456
AIMP1_chr4_106311550_106354456	0/0	g0017	3	0	0	3	0	0	AIMP1	chr4	106311550	106354456
AIMP1_chr4_106311550_106354456	0/0	g0018	3	3	0	0	0	0	AIMP1	chr4	106311550	106354456
AIMP1_chr4_106311550_106354456	0/0	g0019	3	0	2	1	0	0	AIMP1	chr4	106311550	106354456
AIMP1_chr4_106311550_106354456	0/0	g0020	3	3	0	0	0	0	AIMP1	chr4	106311550	106354456
AIMP1_chr4_106311550_106354456	0/0	g0021	3	0	1	0	0	2	AIMP1	chr4	106311550	106354456