JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ABCB5_chr7_20610667_20762008	0/0	g0320	1	0	0	0	0	1	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	0/0	g0321	1	0	0	1	0	0	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	0/0	g0322	1	0	0	1	0	0	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	0/0	g0323	1	0	1	0	0	0	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	0/0	g0324	1	0	0	1	0	0	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	0/0	g0325	1	0	0	1	0	0	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	0/0	g0326	1	0	1	0	0	0	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	0/0	g0327	1	0	0	1	0	0	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	0/0	g0328	1	0	0	1	0	0	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	0/0	g0329	1	1	0	0	0	0	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	0/0	g0330	1	1	0	0	0	0	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	0/0	g0331	1	1	0	0	0	0	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	0/0	g0332	1	0	0	1	0	0	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	0/0	g0333	1	0	0	0	0	1	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	0/0	g0334	1	0	0	0	0	1	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	0/0	g0335	1	0	1	0	0	0	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	0/0	g0336	1	0	1	0	0	0	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	0/0	g0337	1	1	0	0	0	0	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	0/0	g0338	1	0	0	1	0	0	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	0/0	g0339	1	0	0	1	0	0	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	0/0	g0340	1	0	0	0	0	1	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	0/0	g0341	1	1	0	0	0	0	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	0/0	g0342	1	1	0	0	0	0	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	0/0	g0343	1	1	0	0	0	0	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	0/0	g0344	1	1	0	0	0	0	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	0/0	g0345	1	1	0	0	0	0	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	0/0	g0346	1	1	0	0	0	0	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	0/0	g0347	1	0	0	1	0	0	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	0/0	g0348	1	1	0	0	0	0	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	0/0	g0349	1	0	0	1	0	0	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	0/0	g0350	1	0	0	1	0	0	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	0/0	g0351	1	0	1	0	0	0	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	0/0	g0352	1	0	0	0	1	0	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	0/0	g0353	1	0	1	0	0	0	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	0/0	g0354	1	0	0	0	1	0	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	0/0	g0355	1	1	0	0	0	0	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	0/0	g0356	1	1	0	0	0	0	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	0/0	g0357	1	0	0	1	0	0	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	0/0	g0358	1	1	0	0	0	0	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	0/0	g0359	1	0	1	0	0	0	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	0/0	g0360	1	0	1	0	0	0	ABCB5	chr7	20610667	20762008
ABCB6_chr2_219204772_219223958	0/0	g0001	174	20	48	75	13	18	ABCB6	chr2	219204772	219223958
ABCB6_chr2_219204772_219223958	0/0	g0002	24	4	8	6	0	6	ABCB6	chr2	219204772	219223958
ABCB6_chr2_219204772_219223958	0/0	g0003	23	9	0	13	0	1	ABCB6	chr2	219204772	219223958
ABCB6_chr2_219204772_219223958	0/0	g0004	9	0	4	0	1	4	ABCB6	chr2	219204772	219223958
ABCB6_chr2_219204772_219223958	1/0	g0005	8	6	1	0	0	0	ABCB6	chr2	219204772	219223958
ABCB6_chr2_219204772_219223958	0/0	g0006	7	0	1	4	0	2	ABCB6	chr2	219204772	219223958
ABCB6_chr2_219204772_219223958	0/0	g0007	7	6	1	0	0	0	ABCB6	chr2	219204772	219223958
ABCB6_chr2_219204772_219223958	0/0	g0008	6	6	0	0	0	0	ABCB6	chr2	219204772	219223958
ABCB6_chr2_219204772_219223958	0/0	g0009	6	6	0	0	0	0	ABCB6	chr2	219204772	219223958