JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
AKAP9_chr7_91935862_92115673	0/0	g0289	1	1	0	0	0	0	AKAP9	chr7	91935862	92115673
AKAP9_chr7_91935862_92115673	0/0	g0290	1	0	1	0	0	0	AKAP9	chr7	91935862	92115673
AKAP9_chr7_91935862_92115673	0/0	g0291	1	1	0	0	0	0	AKAP9	chr7	91935862	92115673
AKAP9_chr7_91935862_92115673	0/0	g0292	1	1	0	0	0	0	AKAP9	chr7	91935862	92115673
AKAP9_chr7_91935862_92115673	0/0	g0293	1	1	0	0	0	0	AKAP9	chr7	91935862	92115673
AKAP9_chr7_91935862_92115673	0/0	g0294	1	1	0	0	0	0	AKAP9	chr7	91935862	92115673
AKAP9_chr7_91935862_92115673	0/0	g0295	1	1	0	0	0	0	AKAP9	chr7	91935862	92115673
AKAP9_chr7_91935862_92115673	0/0	g0296	1	1	0	0	0	0	AKAP9	chr7	91935862	92115673
AKAP9_chr7_91935862_92115673	0/0	g0297	1	1	0	0	0	0	AKAP9	chr7	91935862	92115673
AKAP9_chr7_91935862_92115673	0/0	g0298	1	0	0	1	0	0	AKAP9	chr7	91935862	92115673
AKAP9_chr7_91935862_92115673	0/0	g0299	1	0	0	1	0	0	AKAP9	chr7	91935862	92115673
AKAP9_chr7_91935862_92115673	0/0	g0300	1	0	0	1	0	0	AKAP9	chr7	91935862	92115673
AKAP9_chr7_91935862_92115673	0/0	g0301	1	1	0	0	0	0	AKAP9	chr7	91935862	92115673
AKAP9_chr7_91935862_92115673	0/0	g0302	1	1	0	0	0	0	AKAP9	chr7	91935862	92115673
AKAP9_chr7_91935862_92115673	0/0	g0303	1	1	0	0	0	0	AKAP9	chr7	91935862	92115673
AKAP9_chr7_91935862_92115673	0/0	g0304	1	1	0	0	0	0	AKAP9	chr7	91935862	92115673
AKAP9_chr7_91935862_92115673	0/0	g0305	1	1	0	0	0	0	AKAP9	chr7	91935862	92115673
AKAP9_chr7_91935862_92115673	0/0	g0306	1	1	0	0	0	0	AKAP9	chr7	91935862	92115673
AKIP1_chr11_8906189_8925079	0/1	g0001	53	3	11	27	5	6	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0002	24	0	4	20	0	0	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0003	23	3	4	14	2	0	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0004	18	0	3	11	2	2	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0005	14	0	0	11	0	3	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0006	14	2	7	0	3	2	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	1/0	g0007	14	10	3	0	0	0	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0008	13	7	2	4	0	0	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0009	9	0	0	9	0	0	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0010	9	0	1	5	0	3	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0011	9	0	0	8	0	1	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0012	8	4	0	3	0	1	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0013	8	5	0	3	0	0	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0014	5	3	0	2	0	0	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0015	5	4	1	0	0	0	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0016	4	0	0	4	0	0	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0017	4	1	1	1	0	1	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0018	4	0	1	3	0	0	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0019	3	0	1	0	0	2	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0020	3	3	0	0	0	0	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0021	3	0	0	0	0	3	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0022	3	0	2	0	1	0	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0023	3	0	0	3	0	0	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0024	3	1	1	0	0	1	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0025	3	0	0	3	0	0	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0026	3	3	0	0	0	0	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0027	3	3	0	0	0	0	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0028	2	2	0	0	0	0	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0029	2	2	0	0	0	0	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0030	2	0	0	2	0	0	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0031	2	0	1	1	0	0	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0032	2	0	0	2	0	0	AKIP1	chr11	8906189	8925079