JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
AKIP1_chr11_8906189_8925079	0/0	g0133	1	0	0	0	0	1	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0134	1	0	0	1	0	0	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0135	1	1	0	0	0	0	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0136	1	0	1	0	0	0	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0137	1	1	0	0	0	0	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0138	1	1	0	0	0	0	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0139	1	1	0	0	0	0	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0140	1	1	0	0	0	0	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0141	1	1	0	0	0	0	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0142	1	1	0	0	0	0	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0143	1	1	0	0	0	0	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0144	1	1	0	0	0	0	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0145	1	1	0	0	0	0	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0146	1	1	0	0	0	0	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0147	1	1	0	0	0	0	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0148	1	1	0	0	0	0	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0149	1	0	1	0	0	0	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0150	1	1	0	0	0	0	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0151	1	1	0	0	0	0	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0152	1	1	0	0	0	0	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0153	1	1	0	0	0	0	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0154	1	1	0	0	0	0	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0155	1	1	0	0	0	0	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0156	1	1	0	0	0	0	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0157	1	1	0	0	0	0	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0158	1	0	0	1	0	0	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0159	1	0	0	1	0	0	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0160	1	1	0	0	0	0	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0161	1	1	0	0	0	0	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0162	1	1	0	0	0	0	AKIP1	chr11	8906189	8925079
AKIP1_chr11_8906189_8925079	0/0	g0163	1	1	0	0	0	0	AKIP1	chr11	8906189	8925079
AKIRIN1_chr1_38986276_39011059	0/0	g0001	24	0	6	13	3	2	AKIRIN1	chr1	38986276	39011059
AKIRIN1_chr1_38986276_39011059	0/0	g0002	21	0	1	18	2	0	AKIRIN1	chr1	38986276	39011059
AKIRIN1_chr1_38986276_39011059	0/0	g0003	13	0	2	11	0	0	AKIRIN1	chr1	38986276	39011059
AKIRIN1_chr1_38986276_39011059	0/0	g0004	12	1	5	5	1	0	AKIRIN1	chr1	38986276	39011059
AKIRIN1_chr1_38986276_39011059	0/1	g0005	10	0	1	0	3	5	AKIRIN1	chr1	38986276	39011059
AKIRIN1_chr1_38986276_39011059	0/0	g0006	8	0	1	7	0	0	AKIRIN1	chr1	38986276	39011059
AKIRIN1_chr1_38986276_39011059	0/0	g0007	8	0	0	8	0	0	AKIRIN1	chr1	38986276	39011059
AKIRIN1_chr1_38986276_39011059	0/0	g0008	7	0	3	2	0	2	AKIRIN1	chr1	38986276	39011059
AKIRIN1_chr1_38986276_39011059	0/0	g0009	7	3	4	0	0	0	AKIRIN1	chr1	38986276	39011059
AKIRIN1_chr1_38986276_39011059	0/0	g0010	6	6	0	0	0	0	AKIRIN1	chr1	38986276	39011059
AKIRIN1_chr1_38986276_39011059	0/0	g0011	6	6	0	0	0	0	AKIRIN1	chr1	38986276	39011059
AKIRIN1_chr1_38986276_39011059	0/0	g0012	5	5	0	0	0	0	AKIRIN1	chr1	38986276	39011059
AKIRIN1_chr1_38986276_39011059	0/0	g0013	5	0	4	1	0	0	AKIRIN1	chr1	38986276	39011059
AKIRIN1_chr1_38986276_39011059	0/0	g0014	5	0	0	5	0	0	AKIRIN1	chr1	38986276	39011059
AKIRIN1_chr1_38986276_39011059	0/0	g0015	5	1	0	3	0	1	AKIRIN1	chr1	38986276	39011059
AKIRIN1_chr1_38986276_39011059	0/0	g0016	4	0	1	3	0	0	AKIRIN1	chr1	38986276	39011059
AKIRIN1_chr1_38986276_39011059	0/0	g0017	4	0	1	1	1	1	AKIRIN1	chr1	38986276	39011059
AKIRIN1_chr1_38986276_39011059	0/0	g0018	4	0	0	3	0	1	AKIRIN1	chr1	38986276	39011059
AKIRIN1_chr1_38986276_39011059	0/0	g0019	4	0	0	4	0	0	AKIRIN1	chr1	38986276	39011059