JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
AKR1A1_chr1_45545826_45575049	0/0	g0210	1	0	0	0	1	0	AKR1A1	chr1	45545826	45575049
AKR1A1_chr1_45545826_45575049	0/0	g0211	1	1	0	0	0	0	AKR1A1	chr1	45545826	45575049
AKR1A1_chr1_45545826_45575049	0/0	g0212	1	0	0	0	1	0	AKR1A1	chr1	45545826	45575049
AKR1A1_chr1_45545826_45575049	0/0	g0213	1	1	0	0	0	0	AKR1A1	chr1	45545826	45575049
AKR1A1_chr1_45545826_45575049	0/0	g0214	1	1	0	0	0	0	AKR1A1	chr1	45545826	45575049
AKR1A1_chr1_45545826_45575049	0/0	g0215	1	1	0	0	0	0	AKR1A1	chr1	45545826	45575049
AKR1A1_chr1_45545826_45575049	0/0	g0216	1	1	0	0	0	0	AKR1A1	chr1	45545826	45575049
AKR1A1_chr1_45545826_45575049	0/0	g0217	1	1	0	0	0	0	AKR1A1	chr1	45545826	45575049
AKR1A1_chr1_45545826_45575049	0/0	g0218	1	0	1	0	0	0	AKR1A1	chr1	45545826	45575049
AKR1A1_chr1_45545826_45575049	0/0	g0219	1	1	0	0	0	0	AKR1A1	chr1	45545826	45575049
AKR1A1_chr1_45545826_45575049	0/0	g0220	1	1	0	0	0	0	AKR1A1	chr1	45545826	45575049
AKR1A1_chr1_45545826_45575049	0/0	g0221	1	1	0	0	0	0	AKR1A1	chr1	45545826	45575049
AKR1A1_chr1_45545826_45575049	0/0	g0222	1	1	0	0	0	0	AKR1A1	chr1	45545826	45575049
AKR1A1_chr1_45545826_45575049	0/0	g0223	1	1	0	0	0	0	AKR1A1	chr1	45545826	45575049
AKR1A1_chr1_45545826_45575049	0/0	g0224	1	1	0	0	0	0	AKR1A1	chr1	45545826	45575049
AKR1A1_chr1_45545826_45575049	0/0	g0225	1	1	0	0	0	0	AKR1A1	chr1	45545826	45575049
AKR1A1_chr1_45545826_45575049	0/0	g0226	1	1	0	0	0	0	AKR1A1	chr1	45545826	45575049
AKR1A1_chr1_45545826_45575049	0/0	g0227	1	0	1	0	0	0	AKR1A1	chr1	45545826	45575049
AKR1B10_chr7_134522567_134546412	0/0	g0001	57	1	6	42	2	6	AKR1B10	chr7	134522567	134546412
AKR1B10_chr7_134522567_134546412	0/0	g0002	35	6	2	24	0	3	AKR1B10	chr7	134522567	134546412
AKR1B10_chr7_134522567_134546412	0/0	g0003	24	2	6	15	0	1	AKR1B10	chr7	134522567	134546412
AKR1B10_chr7_134522567_134546412	0/0	g0004	18	1	10	2	1	4	AKR1B10	chr7	134522567	134546412
AKR1B10_chr7_134522567_134546412	0/1	g0005	17	4	11	0	0	1	AKR1B10	chr7	134522567	134546412
AKR1B10_chr7_134522567_134546412	0/0	g0006	13	0	0	13	0	0	AKR1B10	chr7	134522567	134546412
AKR1B10_chr7_134522567_134546412	0/0	g0007	10	0	10	0	0	0	AKR1B10	chr7	134522567	134546412
AKR1B10_chr7_134522567_134546412	0/0	g0008	8	0	1	7	0	0	AKR1B10	chr7	134522567	134546412
AKR1B10_chr7_134522567_134546412	0/0	g0009	8	0	0	8	0	0	AKR1B10	chr7	134522567	134546412
AKR1B10_chr7_134522567_134546412	0/0	g0010	8	0	1	0	1	6	AKR1B10	chr7	134522567	134546412
AKR1B10_chr7_134522567_134546412	0/0	g0011	7	0	0	7	0	0	AKR1B10	chr7	134522567	134546412
AKR1B10_chr7_134522567_134546412	0/0	g0012	7	5	2	0	0	0	AKR1B10	chr7	134522567	134546412
AKR1B10_chr7_134522567_134546412	0/0	g0013	6	0	0	6	0	0	AKR1B10	chr7	134522567	134546412
AKR1B10_chr7_134522567_134546412	0/0	g0014	5	0	5	0	0	0	AKR1B10	chr7	134522567	134546412
AKR1B10_chr7_134522567_134546412	0/0	g0015	4	4	0	0	0	0	AKR1B10	chr7	134522567	134546412
AKR1B10_chr7_134522567_134546412	0/0	g0016	4	3	1	0	0	0	AKR1B10	chr7	134522567	134546412
AKR1B10_chr7_134522567_134546412	0/0	g0017	4	0	1	0	0	3	AKR1B10	chr7	134522567	134546412
AKR1B10_chr7_134522567_134546412	0/0	g0018	4	0	0	4	0	0	AKR1B10	chr7	134522567	134546412
AKR1B10_chr7_134522567_134546412	0/0	g0019	4	0	0	4	0	0	AKR1B10	chr7	134522567	134546412
AKR1B10_chr7_134522567_134546412	0/0	g0020	4	0	1	3	0	0	AKR1B10	chr7	134522567	134546412
AKR1B10_chr7_134522567_134546412	0/0	g0021	4	0	1	3	0	0	AKR1B10	chr7	134522567	134546412
AKR1B10_chr7_134522567_134546412	0/0	g0022	4	0	1	3	0	0	AKR1B10	chr7	134522567	134546412
AKR1B10_chr7_134522567_134546412	0/0	g0023	4	4	0	0	0	0	AKR1B10	chr7	134522567	134546412
AKR1B10_chr7_134522567_134546412	0/0	g0024	3	3	0	0	0	0	AKR1B10	chr7	134522567	134546412
AKR1B10_chr7_134522567_134546412	0/0	g0025	3	3	0	0	0	0	AKR1B10	chr7	134522567	134546412
AKR1B10_chr7_134522567_134546412	0/0	g0026	3	3	0	0	0	0	AKR1B10	chr7	134522567	134546412
AKR1B10_chr7_134522567_134546412	0/0	g0027	3	0	0	0	1	2	AKR1B10	chr7	134522567	134546412
AKR1B10_chr7_134522567_134546412	0/0	g0028	3	0	1	0	1	1	AKR1B10	chr7	134522567	134546412
AKR1B10_chr7_134522567_134546412	0/0	g0029	3	0	0	3	0	0	AKR1B10	chr7	134522567	134546412
AKR1B10_chr7_134522567_134546412	0/0	g0030	3	0	2	0	1	0	AKR1B10	chr7	134522567	134546412
AKR1B10_chr7_134522567_134546412	0/0	g0031	3	3	0	0	0	0	AKR1B10	chr7	134522567	134546412
AKR1B10_chr7_134522567_134546412	0/0	g0032	3	3	0	0	0	0	AKR1B10	chr7	134522567	134546412