JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
AKR1B1_chr7_134437356_134464100	0/0	g0175	1	1	0	0	0	0	AKR1B1	chr7	134437356	134464100
AKR1B1_chr7_134437356_134464100	0/0	g0176	1	0	0	0	0	1	AKR1B1	chr7	134437356	134464100
AKR1B1_chr7_134437356_134464100	0/0	g0177	1	0	0	0	0	1	AKR1B1	chr7	134437356	134464100
AKR1B1_chr7_134437356_134464100	0/0	g0178	1	1	0	0	0	0	AKR1B1	chr7	134437356	134464100
AKR1B1_chr7_134437356_134464100	0/0	g0179	1	1	0	0	0	0	AKR1B1	chr7	134437356	134464100
AKR1B1_chr7_134437356_134464100	0/0	g0180	1	1	0	0	0	0	AKR1B1	chr7	134437356	134464100
AKR1B1_chr7_134437356_134464100	0/0	g0181	1	1	0	0	0	0	AKR1B1	chr7	134437356	134464100
AKR1B1_chr7_134437356_134464100	0/0	g0182	1	1	0	0	0	0	AKR1B1	chr7	134437356	134464100
AKR1B1_chr7_134437356_134464100	0/0	g0183	1	1	0	0	0	0	AKR1B1	chr7	134437356	134464100
AKR1B1_chr7_134437356_134464100	0/0	g0184	1	1	0	0	0	0	AKR1B1	chr7	134437356	134464100
AKR1B1_chr7_134437356_134464100	0/0	g0185	1	0	1	0	0	0	AKR1B1	chr7	134437356	134464100
AKR1B1_chr7_134437356_134464100	0/0	g0186	1	1	0	0	0	0	AKR1B1	chr7	134437356	134464100
AKR1B1_chr7_134437356_134464100	0/0	g0187	1	0	0	1	0	0	AKR1B1	chr7	134437356	134464100
AKR1B1_chr7_134437356_134464100	0/0	g0188	1	0	0	1	0	0	AKR1B1	chr7	134437356	134464100
AKR1B1_chr7_134437356_134464100	0/0	g0189	1	1	0	0	0	0	AKR1B1	chr7	134437356	134464100
AKR1B1_chr7_134437356_134464100	0/0	g0190	1	1	0	0	0	0	AKR1B1	chr7	134437356	134464100
AKR1B1_chr7_134437356_134464100	0/0	g0191	1	1	0	0	0	0	AKR1B1	chr7	134437356	134464100
AKR1B1_chr7_134437356_134464100	0/0	g0192	1	0	0	1	0	0	AKR1B1	chr7	134437356	134464100
AKR1B1_chr7_134437356_134464100	0/0	g0193	1	1	0	0	0	0	AKR1B1	chr7	134437356	134464100
AKR1B1_chr7_134437356_134464100	0/0	g0194	1	0	0	1	0	0	AKR1B1	chr7	134437356	134464100
AKR1B1_chr7_134437356_134464100	0/0	g0195	1	1	0	0	0	0	AKR1B1	chr7	134437356	134464100
AKR1B1_chr7_134437356_134464100	0/0	g0196	1	0	0	1	0	0	AKR1B1	chr7	134437356	134464100
AKR1B1_chr7_134437356_134464100	0/0	g0197	1	1	0	0	0	0	AKR1B1	chr7	134437356	134464100
AKR1B1_chr7_134437356_134464100	0/0	g0198	1	0	0	1	0	0	AKR1B1	chr7	134437356	134464100
AKR1B1_chr7_134437356_134464100	0/0	g0199	1	0	0	1	0	0	AKR1B1	chr7	134437356	134464100
AKR1B1_chr7_134437356_134464100	0/0	g0200	1	0	0	0	0	1	AKR1B1	chr7	134437356	134464100
AKR1B1_chr7_134437356_134464100	0/0	g0201	1	1	0	0	0	0	AKR1B1	chr7	134437356	134464100
AKR1B1_chr7_134437356_134464100	0/0	g0202	1	0	0	1	0	0	AKR1B1	chr7	134437356	134464100
AKR1B1_chr7_134437356_134464100	0/0	g0203	1	0	0	0	0	1	AKR1B1	chr7	134437356	134464100
AKR1B1_chr7_134437356_134464100	0/0	g0204	1	0	0	1	0	0	AKR1B1	chr7	134437356	134464100
AKR1B1_chr7_134437356_134464100	0/0	g0205	1	0	0	1	0	0	AKR1B1	chr7	134437356	134464100
AKR1C1_chr10_4958415_4988283	0/0	g0001	75	1	12	58	0	4	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	1/0	g0002	68	16	13	23	6	9	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	g0003	52	0	8	37	1	6	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	g0004	12	3	4	1	1	3	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	g0005	12	0	0	12	0	0	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	g0006	8	0	0	8	0	0	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	g0007	7	7	0	0	0	0	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/1	g0008	6	0	0	0	0	5	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	g0009	6	0	0	6	0	0	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	g0010	6	0	2	1	1	2	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	g0011	6	0	0	5	0	1	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	g0012	5	5	0	0	0	0	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	g0013	4	0	3	0	0	1	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	g0014	4	0	0	4	0	0	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	g0015	4	1	2	0	0	1	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	g0016	4	1	3	0	0	0	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	g0017	4	4	0	0	0	0	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	g0018	4	0	0	4	0	0	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	g0019	3	0	2	0	1	0	AKR1C1	chr10	4958415	4988283