JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
AKR1C1_chr10_4958415_4988283	0/0	g0120	1	0	0	1	0	0	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	g0121	1	0	0	1	0	0	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	g0122	1	0	0	1	0	0	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	g0123	1	0	0	1	0	0	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	g0124	1	0	1	0	0	0	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	g0125	1	0	0	1	0	0	AKR1C1	chr10	4958415	4988283
AKR1C2_chr10_4982775_5008857	0/0	g0001	55	1	5	41	1	7	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0002	52	3	4	39	3	3	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0003	20	0	8	12	0	0	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0004	12	6	3	0	1	2	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0005	12	0	4	0	4	4	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0006	11	10	1	0	0	0	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0007	9	0	4	1	1	3	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0008	7	0	0	7	0	0	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0009	7	7	0	0	0	0	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0010	7	0	1	6	0	0	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0011	6	1	4	0	1	0	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0012	6	0	1	3	1	1	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0013	5	1	3	0	0	1	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0014	5	0	0	5	0	0	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/1	g0015	4	0	2	0	0	1	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0016	4	0	0	4	0	0	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0017	4	4	0	0	0	0	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0018	3	3	0	0	0	0	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0019	3	3	0	0	0	0	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0020	3	0	0	3	0	0	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0021	3	0	1	0	0	2	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0022	3	3	0	0	0	0	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0023	3	0	3	0	0	0	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0024	3	0	2	0	0	1	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0025	3	0	0	3	0	0	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0026	3	3	0	0	0	0	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0027	3	3	0	0	0	0	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0028	2	0	0	2	0	0	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0029	2	0	0	2	0	0	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0030	2	0	0	2	0	0	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0031	2	2	0	0	0	0	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0032	2	2	0	0	0	0	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0033	2	0	2	0	0	0	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0034	2	2	0	0	0	0	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0035	2	1	1	0	0	0	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0036	2	2	0	0	0	0	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0037	2	0	1	0	1	0	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0038	2	0	2	0	0	0	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0039	2	1	0	0	0	1	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0040	2	2	0	0	0	0	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0041	2	0	0	0	0	2	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0042	2	2	0	0	0	0	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0043	2	2	0	0	0	0	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0044	2	0	0	0	0	2	AKR1C2	chr10	4982775	5008857