JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
AKR1C2_chr10_4982775_5008857	0/0	g0145	1	0	1	0	0	0	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0146	1	0	0	0	0	1	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0147	1	1	0	0	0	0	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0148	1	0	1	0	0	0	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0149	1	1	0	0	0	0	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0150	1	1	0	0	0	0	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0151	1	1	0	0	0	0	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0152	1	1	0	0	0	0	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0153	1	0	0	0	0	1	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0154	1	0	0	0	0	1	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0155	1	0	0	1	0	0	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0156	1	0	0	1	0	0	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0157	1	0	0	1	0	0	AKR1C2	chr10	4982775	5008857
AKR1C2_chr10_4982775_5008857	0/0	g0158	1	0	0	0	0	1	AKR1C2	chr10	4982775	5008857
AKR1C3_chr10_5089414_5112686	0/0	g0001	75	2	5	65	0	3	AKR1C3	chr10	5089414	5112686
AKR1C3_chr10_5089414_5112686	0/0	g0002	55	9	10	24	5	7	AKR1C3	chr10	5089414	5112686
AKR1C3_chr10_5089414_5112686	0/0	g0003	24	0	6	16	0	2	AKR1C3	chr10	5089414	5112686
AKR1C3_chr10_5089414_5112686	0/0	g0004	20	0	9	11	0	0	AKR1C3	chr10	5089414	5112686
AKR1C3_chr10_5089414_5112686	0/0	g0005	15	0	0	11	0	4	AKR1C3	chr10	5089414	5112686
AKR1C3_chr10_5089414_5112686	0/1	g0006	15	2	8	0	1	3	AKR1C3	chr10	5089414	5112686
AKR1C3_chr10_5089414_5112686	0/0	g0007	9	0	2	7	0	0	AKR1C3	chr10	5089414	5112686
AKR1C3_chr10_5089414_5112686	0/0	g0008	9	0	0	9	0	0	AKR1C3	chr10	5089414	5112686
AKR1C3_chr10_5089414_5112686	0/0	g0009	8	7	1	0	0	0	AKR1C3	chr10	5089414	5112686
AKR1C3_chr10_5089414_5112686	0/0	g0010	8	7	1	0	0	0	AKR1C3	chr10	5089414	5112686
AKR1C3_chr10_5089414_5112686	0/0	g0011	7	1	0	5	0	1	AKR1C3	chr10	5089414	5112686
AKR1C3_chr10_5089414_5112686	0/0	g0012	7	6	1	0	0	0	AKR1C3	chr10	5089414	5112686
AKR1C3_chr10_5089414_5112686	0/0	g0013	6	0	2	0	2	2	AKR1C3	chr10	5089414	5112686
AKR1C3_chr10_5089414_5112686	0/0	g0014	6	1	3	0	0	2	AKR1C3	chr10	5089414	5112686
AKR1C3_chr10_5089414_5112686	0/0	g0015	5	5	0	0	0	0	AKR1C3	chr10	5089414	5112686
AKR1C3_chr10_5089414_5112686	0/0	g0016	5	0	4	0	0	1	AKR1C3	chr10	5089414	5112686
AKR1C3_chr10_5089414_5112686	0/0	g0017	5	5	0	0	0	0	AKR1C3	chr10	5089414	5112686
AKR1C3_chr10_5089414_5112686	0/0	g0018	4	0	2	0	2	0	AKR1C3	chr10	5089414	5112686
AKR1C3_chr10_5089414_5112686	0/0	g0019	4	0	2	0	2	0	AKR1C3	chr10	5089414	5112686
AKR1C3_chr10_5089414_5112686	0/0	g0020	4	0	0	0	1	3	AKR1C3	chr10	5089414	5112686
AKR1C3_chr10_5089414_5112686	0/0	g0021	4	0	0	4	0	0	AKR1C3	chr10	5089414	5112686
AKR1C3_chr10_5089414_5112686	0/0	g0022	4	4	0	0	0	0	AKR1C3	chr10	5089414	5112686
AKR1C3_chr10_5089414_5112686	0/0	g0023	4	0	0	4	0	0	AKR1C3	chr10	5089414	5112686
AKR1C3_chr10_5089414_5112686	0/0	g0024	4	4	0	0	0	0	AKR1C3	chr10	5089414	5112686
AKR1C3_chr10_5089414_5112686	0/0	g0025	3	3	0	0	0	0	AKR1C3	chr10	5089414	5112686
AKR1C3_chr10_5089414_5112686	0/0	g0026	3	2	1	0	0	0	AKR1C3	chr10	5089414	5112686
AKR1C3_chr10_5089414_5112686	0/0	g0027	3	0	0	3	0	0	AKR1C3	chr10	5089414	5112686
AKR1C3_chr10_5089414_5112686	0/0	g0028	3	0	0	3	0	0	AKR1C3	chr10	5089414	5112686
AKR1C3_chr10_5089414_5112686	0/0	g0029	3	0	0	0	0	3	AKR1C3	chr10	5089414	5112686
AKR1C3_chr10_5089414_5112686	0/0	g0030	3	3	0	0	0	0	AKR1C3	chr10	5089414	5112686
AKR1C3_chr10_5089414_5112686	0/0	g0031	2	0	0	2	0	0	AKR1C3	chr10	5089414	5112686
AKR1C3_chr10_5089414_5112686	0/0	g0032	2	0	0	2	0	0	AKR1C3	chr10	5089414	5112686
AKR1C3_chr10_5089414_5112686	0/0	g0033	2	0	2	0	0	0	AKR1C3	chr10	5089414	5112686
AKR1C3_chr10_5089414_5112686	0/0	g0034	2	0	1	0	1	0	AKR1C3	chr10	5089414	5112686
AKR1C3_chr10_5089414_5112686	0/0	g0035	2	2	0	0	0	0	AKR1C3	chr10	5089414	5112686
AKR1C3_chr10_5089414_5112686	0/0	g0036	2	2	0	0	0	0	AKR1C3	chr10	5089414	5112686