JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
AKR1C4_chr10_5191837_5223949	0/0	g0204	1	1	0	0	0	0	AKR1C4	chr10	5191837	5223949
AKR1C4_chr10_5191837_5223949	0/0	g0205	1	1	0	0	0	0	AKR1C4	chr10	5191837	5223949
AKR1C4_chr10_5191837_5223949	0/0	g0206	1	1	0	0	0	0	AKR1C4	chr10	5191837	5223949
AKR1C4_chr10_5191837_5223949	0/0	g0207	1	1	0	0	0	0	AKR1C4	chr10	5191837	5223949
AKR1C4_chr10_5191837_5223949	0/0	g0208	1	1	0	0	0	0	AKR1C4	chr10	5191837	5223949
AKR1C4_chr10_5191837_5223949	0/0	g0209	1	1	0	0	0	0	AKR1C4	chr10	5191837	5223949
AKR1C4_chr10_5191837_5223949	0/0	g0210	1	1	0	0	0	0	AKR1C4	chr10	5191837	5223949
AKR1C4_chr10_5191837_5223949	0/0	g0211	1	1	0	0	0	0	AKR1C4	chr10	5191837	5223949
AKR1C4_chr10_5191837_5223949	0/0	g0212	1	1	0	0	0	0	AKR1C4	chr10	5191837	5223949
AKR1C4_chr10_5191837_5223949	0/0	g0213	1	1	0	0	0	0	AKR1C4	chr10	5191837	5223949
AKR1C4_chr10_5191837_5223949	0/0	g0214	1	0	0	1	0	0	AKR1C4	chr10	5191837	5223949
AKR1C4_chr10_5191837_5223949	0/0	g0215	1	1	0	0	0	0	AKR1C4	chr10	5191837	5223949
AKR1C4_chr10_5191837_5223949	0/0	g0216	1	1	0	0	0	0	AKR1C4	chr10	5191837	5223949
AKR1C4_chr10_5191837_5223949	0/0	g0217	1	1	0	0	0	0	AKR1C4	chr10	5191837	5223949
AKR1C4_chr10_5191837_5223949	0/0	g0218	1	1	0	0	0	0	AKR1C4	chr10	5191837	5223949
AKR1C4_chr10_5191837_5223949	0/0	g0219	1	1	0	0	0	0	AKR1C4	chr10	5191837	5223949
AKR1C4_chr10_5191837_5223949	0/0	g0220	1	0	1	0	0	0	AKR1C4	chr10	5191837	5223949
AKR1C4_chr10_5191837_5223949	0/0	g0221	1	0	1	0	0	0	AKR1C4	chr10	5191837	5223949
AKR1C4_chr10_5191837_5223949	0/0	g0222	1	1	0	0	0	0	AKR1C4	chr10	5191837	5223949
AKR1C8_chr10_5148920_5190150	0/0	g0001	24	0	4	14	2	4	AKR1C8	chr10	5148920	5190150
AKR1C8_chr10_5148920_5190150	0/0	g0002	16	1	2	11	0	2	AKR1C8	chr10	5148920	5190150
AKR1C8_chr10_5148920_5190150	0/0	g0003	15	3	0	10	1	1	AKR1C8	chr10	5148920	5190150
AKR1C8_chr10_5148920_5190150	0/0	g0004	15	0	7	8	0	0	AKR1C8	chr10	5148920	5190150
AKR1C8_chr10_5148920_5190150	0/0	g0005	5	0	2	3	0	0	AKR1C8	chr10	5148920	5190150
AKR1C8_chr10_5148920_5190150	0/0	g0006	5	5	0	0	0	0	AKR1C8	chr10	5148920	5190150
AKR1C8_chr10_5148920_5190150	0/0	g0007	5	0	0	5	0	0	AKR1C8	chr10	5148920	5190150
AKR1C8_chr10_5148920_5190150	0/0	g0008	4	0	3	0	0	1	AKR1C8	chr10	5148920	5190150
AKR1C8_chr10_5148920_5190150	0/0	g0009	4	0	0	4	0	0	AKR1C8	chr10	5148920	5190150
AKR1C8_chr10_5148920_5190150	0/0	g0010	4	4	0	0	0	0	AKR1C8	chr10	5148920	5190150
AKR1C8_chr10_5148920_5190150	0/0	g0011	4	0	0	4	0	0	AKR1C8	chr10	5148920	5190150
AKR1C8_chr10_5148920_5190150	0/0	g0012	4	0	0	4	0	0	AKR1C8	chr10	5148920	5190150
AKR1C8_chr10_5148920_5190150	0/0	g0013	4	0	3	0	1	0	AKR1C8	chr10	5148920	5190150
AKR1C8_chr10_5148920_5190150	0/0	g0014	4	1	1	2	0	0	AKR1C8	chr10	5148920	5190150
AKR1C8_chr10_5148920_5190150	0/0	g0015	4	0	4	0	0	0	AKR1C8	chr10	5148920	5190150
AKR1C8_chr10_5148920_5190150	0/0	g0016	4	4	0	0	0	0	AKR1C8	chr10	5148920	5190150
AKR1C8_chr10_5148920_5190150	0/0	g0017	3	2	1	0	0	0	AKR1C8	chr10	5148920	5190150
AKR1C8_chr10_5148920_5190150	0/0	g0018	3	3	0	0	0	0	AKR1C8	chr10	5148920	5190150
AKR1C8_chr10_5148920_5190150	0/0	g0019	3	3	0	0	0	0	AKR1C8	chr10	5148920	5190150
AKR1C8_chr10_5148920_5190150	0/0	g0020	3	0	0	3	0	0	AKR1C8	chr10	5148920	5190150
AKR1C8_chr10_5148920_5190150	0/0	g0021	3	0	2	0	0	1	AKR1C8	chr10	5148920	5190150
AKR1C8_chr10_5148920_5190150	0/0	g0022	3	2	1	0	0	0	AKR1C8	chr10	5148920	5190150
AKR1C8_chr10_5148920_5190150	0/0	g0023	3	3	0	0	0	0	AKR1C8	chr10	5148920	5190150
AKR1C8_chr10_5148920_5190150	0/0	g0024	3	0	2	0	0	1	AKR1C8	chr10	5148920	5190150
AKR1C8_chr10_5148920_5190150	0/0	g0025	3	3	0	0	0	0	AKR1C8	chr10	5148920	5190150
AKR1C8_chr10_5148920_5190150	0/0	g0026	2	0	0	2	0	0	AKR1C8	chr10	5148920	5190150
AKR1C8_chr10_5148920_5190150	0/0	g0027	2	0	0	2	0	0	AKR1C8	chr10	5148920	5190150
AKR1C8_chr10_5148920_5190150	0/0	g0028	2	0	2	0	0	0	AKR1C8	chr10	5148920	5190150
AKR1C8_chr10_5148920_5190150	0/0	g0029	2	0	0	2	0	0	AKR1C8	chr10	5148920	5190150
AKR1C8_chr10_5148920_5190150	0/0	g0030	2	0	0	2	0	0	AKR1C8	chr10	5148920	5190150
AKR1C8_chr10_5148920_5190150	0/0	g0031	2	2	0	0	0	0	AKR1C8	chr10	5148920	5190150