JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
AKR1E2_chr10_4821207_4853062	0/0	g0116	1	0	1	0	0	0	AKR1E2	chr10	4821207	4853062
AKR1E2_chr10_4821207_4853062	0/0	g0117	1	0	0	0	0	1	AKR1E2	chr10	4821207	4853062
AKR1E2_chr10_4821207_4853062	0/0	g0118	1	0	0	1	0	0	AKR1E2	chr10	4821207	4853062
AKR1E2_chr10_4821207_4853062	0/0	g0119	1	1	0	0	0	0	AKR1E2	chr10	4821207	4853062
AKR1E2_chr10_4821207_4853062	0/0	g0120	1	1	0	0	0	0	AKR1E2	chr10	4821207	4853062
AKR1E2_chr10_4821207_4853062	0/0	g0121	1	1	0	0	0	0	AKR1E2	chr10	4821207	4853062
AKR1E2_chr10_4821207_4853062	0/0	g0122	1	1	0	0	0	0	AKR1E2	chr10	4821207	4853062
AKR1E2_chr10_4821207_4853062	0/0	g0123	1	1	0	0	0	0	AKR1E2	chr10	4821207	4853062
AKR1E2_chr10_4821207_4853062	0/0	g0124	1	1	0	0	0	0	AKR1E2	chr10	4821207	4853062
AKR1E2_chr10_4821207_4853062	0/0	g0125	1	1	0	0	0	0	AKR1E2	chr10	4821207	4853062
AKR1E2_chr10_4821207_4853062	0/0	g0126	1	1	0	0	0	0	AKR1E2	chr10	4821207	4853062
AKR1E2_chr10_4821207_4853062	0/0	g0127	1	1	0	0	0	0	AKR1E2	chr10	4821207	4853062
AKR1E2_chr10_4821207_4853062	0/0	g0128	1	0	1	0	0	0	AKR1E2	chr10	4821207	4853062
AKR1E2_chr10_4821207_4853062	0/0	g0129	1	0	0	0	0	1	AKR1E2	chr10	4821207	4853062
AKR1E2_chr10_4821207_4853062	0/0	g0130	1	1	0	0	0	0	AKR1E2	chr10	4821207	4853062
AKR1E2_chr10_4821207_4853062	0/0	g0131	1	1	0	0	0	0	AKR1E2	chr10	4821207	4853062
AKR1E2_chr10_4821207_4853062	0/0	g0132	1	1	0	0	0	0	AKR1E2	chr10	4821207	4853062
AKR1E2_chr10_4821207_4853062	0/0	g0133	1	1	0	0	0	0	AKR1E2	chr10	4821207	4853062
AKR1E2_chr10_4821207_4853062	0/0	g0134	1	1	0	0	0	0	AKR1E2	chr10	4821207	4853062
AKR1E2_chr10_4821207_4853062	0/0	g0135	1	1	0	0	0	0	AKR1E2	chr10	4821207	4853062
AKR1E2_chr10_4821207_4853062	0/0	g0136	1	1	0	0	0	0	AKR1E2	chr10	4821207	4853062
AKR1E2_chr10_4821207_4853062	0/0	g0137	1	0	1	0	0	0	AKR1E2	chr10	4821207	4853062
AKR1E2_chr10_4821207_4853062	0/0	g0138	1	0	0	0	1	0	AKR1E2	chr10	4821207	4853062
AKR1E2_chr10_4821207_4853062	0/0	g0139	1	1	0	0	0	0	AKR1E2	chr10	4821207	4853062
AKR1E2_chr10_4821207_4853062	0/0	g0140	1	0	0	1	0	0	AKR1E2	chr10	4821207	4853062
AKR1E2_chr10_4821207_4853062	0/0	g0141	1	1	0	0	0	0	AKR1E2	chr10	4821207	4853062
AKR1E2_chr10_4821207_4853062	0/0	g0142	1	1	0	0	0	0	AKR1E2	chr10	4821207	4853062
AKR1E2_chr10_4821207_4853062	0/0	g0143	1	1	0	0	0	0	AKR1E2	chr10	4821207	4853062
AKR1E2_chr10_4821207_4853062	0/0	g0144	1	0	0	0	0	1	AKR1E2	chr10	4821207	4853062
AKR1E2_chr10_4821207_4853062	0/0	g0145	1	0	1	0	0	0	AKR1E2	chr10	4821207	4853062
AKR1E2_chr10_4821207_4853062	0/0	g0146	1	0	0	0	0	1	AKR1E2	chr10	4821207	4853062
AKR1E2_chr10_4821207_4853062	0/0	g0147	1	0	1	0	0	0	AKR1E2	chr10	4821207	4853062
AKR7A2_chr1_19298965_19317144	0/0	g0001	91	9	17	58	1	6	AKR7A2	chr1	19298965	19317144
AKR7A2_chr1_19298965_19317144	0/0	g0002	32	2	5	18	3	4	AKR7A2	chr1	19298965	19317144
AKR7A2_chr1_19298965_19317144	0/0	g0003	23	0	3	10	1	9	AKR7A2	chr1	19298965	19317144
AKR7A2_chr1_19298965_19317144	0/0	g0004	19	1	1	13	0	4	AKR7A2	chr1	19298965	19317144
AKR7A2_chr1_19298965_19317144	0/0	g0005	9	7	2	0	0	0	AKR7A2	chr1	19298965	19317144
AKR7A2_chr1_19298965_19317144	1/0	g0006	8	0	2	5	0	0	AKR7A2	chr1	19298965	19317144
AKR7A2_chr1_19298965_19317144	0/0	g0007	8	0	3	0	1	4	AKR7A2	chr1	19298965	19317144
AKR7A2_chr1_19298965_19317144	0/0	g0008	7	4	2	0	0	1	AKR7A2	chr1	19298965	19317144
AKR7A2_chr1_19298965_19317144	0/0	g0009	6	0	5	0	0	1	AKR7A2	chr1	19298965	19317144
AKR7A2_chr1_19298965_19317144	0/0	g0010	5	0	0	5	0	0	AKR7A2	chr1	19298965	19317144
AKR7A2_chr1_19298965_19317144	0/0	g0011	5	0	0	5	0	0	AKR7A2	chr1	19298965	19317144
AKR7A2_chr1_19298965_19317144	0/0	g0012	5	0	2	2	0	1	AKR7A2	chr1	19298965	19317144
AKR7A2_chr1_19298965_19317144	0/0	g0013	5	3	0	2	0	0	AKR7A2	chr1	19298965	19317144
AKR7A2_chr1_19298965_19317144	0/0	g0014	5	0	0	4	0	1	AKR7A2	chr1	19298965	19317144
AKR7A2_chr1_19298965_19317144	0/0	g0015	5	0	0	4	1	0	AKR7A2	chr1	19298965	19317144
AKR7A2_chr1_19298965_19317144	0/0	g0016	5	0	1	3	1	0	AKR7A2	chr1	19298965	19317144
AKR7A2_chr1_19298965_19317144	0/0	g0017	5	0	0	5	0	0	AKR7A2	chr1	19298965	19317144
AKR7A2_chr1_19298965_19317144	0/0	g0018	4	0	4	0	0	0	AKR7A2	chr1	19298965	19317144