JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
AKR7A3_chr1_19277573_19293770	0/0	g0054	1	0	1	0	0	0	AKR7A3	chr1	19277573	19293770
AKR7A3_chr1_19277573_19293770	0/0	g0055	1	0	0	1	0	0	AKR7A3	chr1	19277573	19293770
AKR7A3_chr1_19277573_19293770	0/0	g0056	1	1	0	0	0	0	AKR7A3	chr1	19277573	19293770
AKR7A3_chr1_19277573_19293770	0/0	g0057	1	1	0	0	0	0	AKR7A3	chr1	19277573	19293770
AKR7A3_chr1_19277573_19293770	0/0	g0058	1	0	0	1	0	0	AKR7A3	chr1	19277573	19293770
AKR7A3_chr1_19277573_19293770	0/0	g0059	1	0	1	0	0	0	AKR7A3	chr1	19277573	19293770
AKR7A3_chr1_19277573_19293770	0/0	g0060	1	0	1	0	0	0	AKR7A3	chr1	19277573	19293770
AKR7A3_chr1_19277573_19293770	0/0	g0061	1	0	0	0	0	1	AKR7A3	chr1	19277573	19293770
AKR7A3_chr1_19277573_19293770	0/0	g0062	1	1	0	0	0	0	AKR7A3	chr1	19277573	19293770
AKR7A3_chr1_19277573_19293770	0/0	g0063	1	0	0	0	0	1	AKR7A3	chr1	19277573	19293770
AKR7A3_chr1_19277573_19293770	0/0	g0064	1	1	0	0	0	0	AKR7A3	chr1	19277573	19293770
AKR7A3_chr1_19277573_19293770	0/0	g0065	1	0	0	0	0	1	AKR7A3	chr1	19277573	19293770
AKR7A3_chr1_19277573_19293770	0/0	g0066	1	0	1	0	0	0	AKR7A3	chr1	19277573	19293770
AKR7A3_chr1_19277573_19293770	0/0	g0067	1	1	0	0	0	0	AKR7A3	chr1	19277573	19293770
AKR7A3_chr1_19277573_19293770	0/0	g0068	1	1	0	0	0	0	AKR7A3	chr1	19277573	19293770
AKR7A3_chr1_19277573_19293770	0/0	g0069	1	1	0	0	0	0	AKR7A3	chr1	19277573	19293770
AKR7A3_chr1_19277573_19293770	0/0	g0070	1	0	0	0	0	1	AKR7A3	chr1	19277573	19293770
AKR7A3_chr1_19277573_19293770	0/0	g0071	1	1	0	0	0	0	AKR7A3	chr1	19277573	19293770
AKR7A3_chr1_19277573_19293770	0/0	g0072	1	1	0	0	0	0	AKR7A3	chr1	19277573	19293770
AKR7A3_chr1_19277573_19293770	0/0	g0073	1	1	0	0	0	0	AKR7A3	chr1	19277573	19293770
AKR7A3_chr1_19277573_19293770	0/0	g0074	1	0	0	1	0	0	AKR7A3	chr1	19277573	19293770
AKR7A3_chr1_19277573_19293770	0/0	g0075	1	0	1	0	0	0	AKR7A3	chr1	19277573	19293770
AKR7A3_chr1_19277573_19293770	0/0	g0076	1	0	0	1	0	0	AKR7A3	chr1	19277573	19293770
AKR7A3_chr1_19277573_19293770	0/0	g0077	1	1	0	0	0	0	AKR7A3	chr1	19277573	19293770
AKR7A3_chr1_19277573_19293770	0/0	g0078	1	0	0	0	0	1	AKR7A3	chr1	19277573	19293770
AKR7A3_chr1_19277573_19293770	0/0	g0079	1	0	0	1	0	0	AKR7A3	chr1	19277573	19293770
AKR7A3_chr1_19277573_19293770	0/0	g0080	1	1	0	0	0	0	AKR7A3	chr1	19277573	19293770
AKR7A3_chr1_19277573_19293770	0/0	g0081	1	0	0	1	0	0	AKR7A3	chr1	19277573	19293770
AKR7A3_chr1_19277573_19293770	0/0	g0082	1	0	0	1	0	0	AKR7A3	chr1	19277573	19293770
AKR7A3_chr1_19277573_19293770	0/0	g0083	1	0	0	1	0	0	AKR7A3	chr1	19277573	19293770
AKR7A3_chr1_19277573_19293770	0/0	g0084	1	0	0	1	0	0	AKR7A3	chr1	19277573	19293770
AKR7A3_chr1_19277573_19293770	0/0	g0085	1	0	0	1	0	0	AKR7A3	chr1	19277573	19293770
AKR7A3_chr1_19277573_19293770	0/0	g0086	1	0	0	0	0	1	AKR7A3	chr1	19277573	19293770
AKR7A3_chr1_19277573_19293770	0/0	g0087	1	0	0	1	0	0	AKR7A3	chr1	19277573	19293770
AKR7A3_chr1_19277573_19293770	0/0	g0088	1	0	0	1	0	0	AKR7A3	chr1	19277573	19293770
AKR7A3_chr1_19277573_19293770	0/0	g0089	1	0	0	1	0	0	AKR7A3	chr1	19277573	19293770
AKR7A3_chr1_19277573_19293770	0/0	g0090	1	0	0	1	0	0	AKR7A3	chr1	19277573	19293770
AKR7A3_chr1_19277573_19293770	0/0	g0091	1	0	0	0	1	0	AKR7A3	chr1	19277573	19293770
AKT1S1_chr19_49864039_49882355	1/1	g0001	127	10	24	74	6	11	AKT1S1	chr19	49864039	49882355
AKT1S1_chr19_49864039_49882355	0/0	g0002	76	19	14	21	5	17	AKT1S1	chr19	49864039	49882355
AKT1S1_chr19_49864039_49882355	0/0	g0003	22	1	3	13	1	4	AKT1S1	chr19	49864039	49882355
AKT1S1_chr19_49864039_49882355	0/0	g0004	22	0	9	12	0	1	AKT1S1	chr19	49864039	49882355
AKT1S1_chr19_49864039_49882355	0/0	g0005	17	0	0	17	0	0	AKT1S1	chr19	49864039	49882355
AKT1S1_chr19_49864039_49882355	0/0	g0006	11	1	4	6	0	0	AKT1S1	chr19	49864039	49882355
AKT1S1_chr19_49864039_49882355	0/0	g0007	10	10	0	0	0	0	AKT1S1	chr19	49864039	49882355
AKT1S1_chr19_49864039_49882355	0/0	g0008	8	3	0	4	0	1	AKT1S1	chr19	49864039	49882355
AKT1S1_chr19_49864039_49882355	0/0	g0009	7	0	5	2	0	0	AKT1S1	chr19	49864039	49882355
AKT1S1_chr19_49864039_49882355	0/0	g0010	6	0	0	6	0	0	AKT1S1	chr19	49864039	49882355
AKT1S1_chr19_49864039_49882355	0/0	g0011	5	5	0	0	0	0	AKT1S1	chr19	49864039	49882355
AKT1S1_chr19_49864039_49882355	0/0	g0012	5	5	0	0	0	0	AKT1S1	chr19	49864039	49882355