JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ALDOA_chr16_30060760_30075414	0/0	g0016	2	2	0	0	0	0	ALDOA	chr16	30060760	30075414
ALDOA_chr16_30060760_30075414	0/0	g0017	2	2	0	0	0	0	ALDOA	chr16	30060760	30075414
ALDOA_chr16_30060760_30075414	0/0	g0018	2	2	0	0	0	0	ALDOA	chr16	30060760	30075414
ALDOA_chr16_30060760_30075414	0/0	g0019	2	1	0	0	0	1	ALDOA	chr16	30060760	30075414
ALDOA_chr16_30060760_30075414	0/0	g0020	2	0	0	2	0	0	ALDOA	chr16	30060760	30075414
ALDOA_chr16_30060760_30075414	0/0	g0021	2	0	0	2	0	0	ALDOA	chr16	30060760	30075414
ALDOA_chr16_30060760_30075414	0/0	g0022	2	0	1	1	0	0	ALDOA	chr16	30060760	30075414
ALDOA_chr16_30060760_30075414	0/0	g0023	1	0	0	1	0	0	ALDOA	chr16	30060760	30075414
ALDOA_chr16_30060760_30075414	0/0	g0024	1	0	0	1	0	0	ALDOA	chr16	30060760	30075414
ALDOA_chr16_30060760_30075414	0/0	g0025	1	0	0	1	0	0	ALDOA	chr16	30060760	30075414
ALDOA_chr16_30060760_30075414	0/0	g0026	1	0	1	0	0	0	ALDOA	chr16	30060760	30075414
ALDOA_chr16_30060760_30075414	0/0	g0027	1	0	1	0	0	0	ALDOA	chr16	30060760	30075414
ALDOA_chr16_30060760_30075414	0/0	g0028	1	1	0	0	0	0	ALDOA	chr16	30060760	30075414
ALDOA_chr16_30060760_30075414	0/0	g0029	1	0	0	1	0	0	ALDOA	chr16	30060760	30075414
ALDOA_chr16_30060760_30075414	0/0	g0030	1	1	0	0	0	0	ALDOA	chr16	30060760	30075414
ALDOA_chr16_30060760_30075414	0/0	g0031	1	0	1	0	0	0	ALDOA	chr16	30060760	30075414
ALDOA_chr16_30060760_30075414	0/0	g0032	1	1	0	0	0	0	ALDOA	chr16	30060760	30075414
ALDOA_chr16_30060760_30075414	0/0	g0033	1	1	0	0	0	0	ALDOA	chr16	30060760	30075414
ALDOA_chr16_30060760_30075414	0/0	g0034	1	1	0	0	0	0	ALDOA	chr16	30060760	30075414
ALDOA_chr16_30060760_30075414	0/0	g0035	1	1	0	0	0	0	ALDOA	chr16	30060760	30075414
ALDOA_chr16_30060760_30075414	0/0	g0036	1	1	0	0	0	0	ALDOA	chr16	30060760	30075414
ALDOA_chr16_30060760_30075414	0/0	g0037	1	0	0	1	0	0	ALDOA	chr16	30060760	30075414
ALDOA_chr16_30060760_30075414	0/0	g0038	1	0	0	1	0	0	ALDOA	chr16	30060760	30075414
ALDOA_chr16_30060760_30075414	0/0	g0039	1	1	0	0	0	0	ALDOA	chr16	30060760	30075414
ALDOA_chr16_30060760_30075414	0/0	g0040	1	1	0	0	0	0	ALDOA	chr16	30060760	30075414
ALDOA_chr16_30060760_30075414	0/0	g0041	1	1	0	0	0	0	ALDOA	chr16	30060760	30075414
ALDOA_chr16_30060760_30075414	0/0	g0042	1	1	0	0	0	0	ALDOA	chr16	30060760	30075414
ALDOA_chr16_30060760_30075414	0/0	g0043	1	1	0	0	0	0	ALDOA	chr16	30060760	30075414
ALDOA_chr16_30060760_30075414	0/0	g0044	1	0	0	1	0	0	ALDOA	chr16	30060760	30075414
ALDOA_chr16_30060760_30075414	0/0	g0045	1	0	0	1	0	0	ALDOA	chr16	30060760	30075414
ALDOA_chr16_30060760_30075414	0/0	g0046	1	1	0	0	0	0	ALDOA	chr16	30060760	30075414
ALDOB_chr9_101415560_101440774	0/0	g0001	57	2	6	39	2	8	ALDOB	chr9	101415560	101440774
ALDOB_chr9_101415560_101440774	0/0	g0002	46	7	5	28	0	6	ALDOB	chr9	101415560	101440774
ALDOB_chr9_101415560_101440774	0/0	g0003	20	0	2	17	0	1	ALDOB	chr9	101415560	101440774
ALDOB_chr9_101415560_101440774	0/0	g0004	19	1	14	2	1	1	ALDOB	chr9	101415560	101440774
ALDOB_chr9_101415560_101440774	0/0	g0005	18	10	0	5	0	3	ALDOB	chr9	101415560	101440774
ALDOB_chr9_101415560_101440774	0/0	g0006	15	0	0	15	0	0	ALDOB	chr9	101415560	101440774
ALDOB_chr9_101415560_101440774	0/1	g0007	14	3	4	2	2	2	ALDOB	chr9	101415560	101440774
ALDOB_chr9_101415560_101440774	0/0	g0008	10	0	0	9	0	1	ALDOB	chr9	101415560	101440774
ALDOB_chr9_101415560_101440774	0/0	g0009	10	1	7	0	2	0	ALDOB	chr9	101415560	101440774
ALDOB_chr9_101415560_101440774	0/0	g0010	10	8	2	0	0	0	ALDOB	chr9	101415560	101440774
ALDOB_chr9_101415560_101440774	0/0	g0011	9	3	0	6	0	0	ALDOB	chr9	101415560	101440774
ALDOB_chr9_101415560_101440774	0/0	g0012	7	0	1	0	1	5	ALDOB	chr9	101415560	101440774
ALDOB_chr9_101415560_101440774	0/0	g0013	6	0	0	6	0	0	ALDOB	chr9	101415560	101440774
ALDOB_chr9_101415560_101440774	0/0	g0014	5	0	1	0	0	4	ALDOB	chr9	101415560	101440774
ALDOB_chr9_101415560_101440774	0/0	g0015	4	3	1	0	0	0	ALDOB	chr9	101415560	101440774
ALDOB_chr9_101415560_101440774	0/0	g0016	4	0	2	0	0	2	ALDOB	chr9	101415560	101440774
ALDOB_chr9_101415560_101440774	0/0	g0017	4	1	2	0	1	0	ALDOB	chr9	101415560	101440774
ALDOB_chr9_101415560_101440774	0/0	g0018	3	3	0	0	0	0	ALDOB	chr9	101415560	101440774
ALDOB_chr9_101415560_101440774	0/0	g0019	3	3	0	0	0	0	ALDOB	chr9	101415560	101440774