JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ANKIB1_chr7_92240974_92406383	0/0	g0298	1	0	0	1	0	0	ANKIB1	chr7	92240974	92406383
ANKIB1_chr7_92240974_92406383	0/0	g0299	1	0	0	1	0	0	ANKIB1	chr7	92240974	92406383
ANKIB1_chr7_92240974_92406383	0/0	g0300	1	0	0	1	0	0	ANKIB1	chr7	92240974	92406383
ANKIB1_chr7_92240974_92406383	0/0	g0301	1	0	0	1	0	0	ANKIB1	chr7	92240974	92406383
ANKIB1_chr7_92240974_92406383	0/0	g0302	1	0	0	1	0	0	ANKIB1	chr7	92240974	92406383
ANKIB1_chr7_92240974_92406383	0/0	g0303	1	0	0	1	0	0	ANKIB1	chr7	92240974	92406383
ANKIB1_chr7_92240974_92406383	0/0	g0304	1	0	0	1	0	0	ANKIB1	chr7	92240974	92406383
ANKIB1_chr7_92240974_92406383	0/0	g0305	1	0	0	1	0	0	ANKIB1	chr7	92240974	92406383
ANKIB1_chr7_92240974_92406383	0/0	g0306	1	1	0	0	0	0	ANKIB1	chr7	92240974	92406383
ANKIB1_chr7_92240974_92406383	0/0	g0307	1	1	0	0	0	0	ANKIB1	chr7	92240974	92406383
ANKIB1_chr7_92240974_92406383	0/0	g0308	1	0	1	0	0	0	ANKIB1	chr7	92240974	92406383
ANKIB1_chr7_92240974_92406383	0/0	g0309	1	0	1	0	0	0	ANKIB1	chr7	92240974	92406383
ANKIB1_chr7_92240974_92406383	0/0	g0310	1	0	0	1	0	0	ANKIB1	chr7	92240974	92406383
ANKIB1_chr7_92240974_92406383	0/0	g0311	1	1	0	0	0	0	ANKIB1	chr7	92240974	92406383
ANKIB1_chr7_92240974_92406383	0/0	g0312	1	0	0	1	0	0	ANKIB1	chr7	92240974	92406383
ANKIB1_chr7_92240974_92406383	0/0	g0313	1	0	1	0	0	0	ANKIB1	chr7	92240974	92406383
ANKIB1_chr7_92240974_92406383	0/0	g0314	1	1	0	0	0	0	ANKIB1	chr7	92240974	92406383
ANKK1_chr11_113382779_113405416	0/0	g0001	67	1	9	52	0	5	ANKK1	chr11	113382779	113405416
ANKK1_chr11_113382779_113405416	0/0	g0002	59	0	2	53	1	3	ANKK1	chr11	113382779	113405416
ANKK1_chr11_113382779_113405416	0/1	g0003	39	2	26	6	2	2	ANKK1	chr11	113382779	113405416
ANKK1_chr11_113382779_113405416	1/0	g0004	34	14	8	3	1	7	ANKK1	chr11	113382779	113405416
ANKK1_chr11_113382779_113405416	0/0	g0005	15	0	4	9	0	2	ANKK1	chr11	113382779	113405416
ANKK1_chr11_113382779_113405416	0/0	g0006	10	0	1	9	0	0	ANKK1	chr11	113382779	113405416
ANKK1_chr11_113382779_113405416	0/0	g0007	9	8	1	0	0	0	ANKK1	chr11	113382779	113405416
ANKK1_chr11_113382779_113405416	0/0	g0008	8	0	3	5	0	0	ANKK1	chr11	113382779	113405416
ANKK1_chr11_113382779_113405416	0/0	g0009	7	5	2	0	0	0	ANKK1	chr11	113382779	113405416
ANKK1_chr11_113382779_113405416	0/0	g0010	6	0	2	0	1	3	ANKK1	chr11	113382779	113405416
ANKK1_chr11_113382779_113405416	0/0	g0011	6	0	1	5	0	0	ANKK1	chr11	113382779	113405416
ANKK1_chr11_113382779_113405416	0/0	g0012	5	0	0	5	0	0	ANKK1	chr11	113382779	113405416
ANKK1_chr11_113382779_113405416	0/0	g0013	5	5	0	0	0	0	ANKK1	chr11	113382779	113405416
ANKK1_chr11_113382779_113405416	0/0	g0014	5	3	2	0	0	0	ANKK1	chr11	113382779	113405416
ANKK1_chr11_113382779_113405416	0/0	g0015	5	5	0	0	0	0	ANKK1	chr11	113382779	113405416
ANKK1_chr11_113382779_113405416	0/0	g0016	5	4	1	0	0	0	ANKK1	chr11	113382779	113405416
ANKK1_chr11_113382779_113405416	0/0	g0017	3	0	0	3	0	0	ANKK1	chr11	113382779	113405416
ANKK1_chr11_113382779_113405416	0/0	g0018	3	0	2	0	0	1	ANKK1	chr11	113382779	113405416
ANKK1_chr11_113382779_113405416	0/0	g0019	3	3	0	0	0	0	ANKK1	chr11	113382779	113405416
ANKK1_chr11_113382779_113405416	0/0	g0020	3	0	0	3	0	0	ANKK1	chr11	113382779	113405416
ANKK1_chr11_113382779_113405416	0/0	g0021	3	0	0	3	0	0	ANKK1	chr11	113382779	113405416
ANKK1_chr11_113382779_113405416	0/0	g0022	3	0	1	0	0	2	ANKK1	chr11	113382779	113405416
ANKK1_chr11_113382779_113405416	0/0	g0023	3	3	0	0	0	0	ANKK1	chr11	113382779	113405416
ANKK1_chr11_113382779_113405416	0/0	g0024	3	3	0	0	0	0	ANKK1	chr11	113382779	113405416
ANKK1_chr11_113382779_113405416	0/0	g0025	2	2	0	0	0	0	ANKK1	chr11	113382779	113405416
ANKK1_chr11_113382779_113405416	0/0	g0026	2	0	0	0	1	1	ANKK1	chr11	113382779	113405416
ANKK1_chr11_113382779_113405416	0/0	g0027	2	1	0	1	0	0	ANKK1	chr11	113382779	113405416
ANKK1_chr11_113382779_113405416	0/0	g0028	2	0	0	0	2	0	ANKK1	chr11	113382779	113405416
ANKK1_chr11_113382779_113405416	0/0	g0029	2	2	0	0	0	0	ANKK1	chr11	113382779	113405416
ANKK1_chr11_113382779_113405416	0/0	g0030	2	2	0	0	0	0	ANKK1	chr11	113382779	113405416
ANKK1_chr11_113382779_113405416	0/0	g0031	2	0	0	2	0	0	ANKK1	chr11	113382779	113405416
ANKK1_chr11_113382779_113405416	0/0	g0032	2	2	0	0	0	0	ANKK1	chr11	113382779	113405416
ANKK1_chr11_113382779_113405416	0/0	g0033	2	0	0	2	0	0	ANKK1	chr11	113382779	113405416