JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ANKRD34C_chr15_79277722_79303239	0/0	g0222	1	1	0	0	0	0	ANKRD34C	chr15	79277722	79303239
ANKRD34C_chr15_79277722_79303239	0/0	g0223	1	0	0	1	0	0	ANKRD34C	chr15	79277722	79303239
ANKRD34C_chr15_79277722_79303239	0/0	g0224	1	0	1	0	0	0	ANKRD34C	chr15	79277722	79303239
ANKRD34C_chr15_79277722_79303239	0/0	g0225	1	1	0	0	0	0	ANKRD34C	chr15	79277722	79303239
ANKRD34C_chr15_79277722_79303239	0/0	g0226	1	1	0	0	0	0	ANKRD34C	chr15	79277722	79303239
ANKRD35_chr1_145861564_145890866	0/0	g0001	11	0	1	7	0	3	ANKRD35	chr1	145861564	145890866
ANKRD35_chr1_145861564_145890866	0/0	g0002	8	0	5	3	0	0	ANKRD35	chr1	145861564	145890866
ANKRD35_chr1_145861564_145890866	0/0	g0003	8	0	5	0	3	0	ANKRD35	chr1	145861564	145890866
ANKRD35_chr1_145861564_145890866	0/0	g0004	6	6	0	0	0	0	ANKRD35	chr1	145861564	145890866
ANKRD35_chr1_145861564_145890866	0/0	g0005	6	0	2	0	3	1	ANKRD35	chr1	145861564	145890866
ANKRD35_chr1_145861564_145890866	0/0	g0006	5	0	3	1	0	1	ANKRD35	chr1	145861564	145890866
ANKRD35_chr1_145861564_145890866	0/0	g0007	5	0	0	5	0	0	ANKRD35	chr1	145861564	145890866
ANKRD35_chr1_145861564_145890866	0/0	g0008	4	0	0	4	0	0	ANKRD35	chr1	145861564	145890866
ANKRD35_chr1_145861564_145890866	0/0	g0009	4	0	2	1	0	1	ANKRD35	chr1	145861564	145890866
ANKRD35_chr1_145861564_145890866	0/0	g0010	4	0	3	0	1	0	ANKRD35	chr1	145861564	145890866
ANKRD35_chr1_145861564_145890866	0/0	g0011	4	0	0	4	0	0	ANKRD35	chr1	145861564	145890866
ANKRD35_chr1_145861564_145890866	0/0	g0012	4	3	1	0	0	0	ANKRD35	chr1	145861564	145890866
ANKRD35_chr1_145861564_145890866	0/0	g0013	4	0	0	4	0	0	ANKRD35	chr1	145861564	145890866
ANKRD35_chr1_145861564_145890866	0/0	g0014	3	0	0	0	0	3	ANKRD35	chr1	145861564	145890866
ANKRD35_chr1_145861564_145890866	0/0	g0015	3	3	0	0	0	0	ANKRD35	chr1	145861564	145890866
ANKRD35_chr1_145861564_145890866	0/0	g0016	3	0	0	3	0	0	ANKRD35	chr1	145861564	145890866
ANKRD35_chr1_145861564_145890866	0/0	g0017	3	0	0	3	0	0	ANKRD35	chr1	145861564	145890866
ANKRD35_chr1_145861564_145890866	0/0	g0018	3	0	2	0	0	1	ANKRD35	chr1	145861564	145890866
ANKRD35_chr1_145861564_145890866	0/0	g0019	3	0	0	3	0	0	ANKRD35	chr1	145861564	145890866
ANKRD35_chr1_145861564_145890866	0/0	g0020	3	0	0	2	0	1	ANKRD35	chr1	145861564	145890866
ANKRD35_chr1_145861564_145890866	0/0	g0021	3	0	1	0	2	0	ANKRD35	chr1	145861564	145890866
ANKRD35_chr1_145861564_145890866	0/0	g0022	3	0	0	3	0	0	ANKRD35	chr1	145861564	145890866
ANKRD35_chr1_145861564_145890866	0/0	g0023	3	0	1	1	0	1	ANKRD35	chr1	145861564	145890866
ANKRD35_chr1_145861564_145890866	0/0	g0024	3	0	0	3	0	0	ANKRD35	chr1	145861564	145890866
ANKRD35_chr1_145861564_145890866	0/0	g0025	3	3	0	0	0	0	ANKRD35	chr1	145861564	145890866
ANKRD35_chr1_145861564_145890866	0/0	g0026	2	0	0	2	0	0	ANKRD35	chr1	145861564	145890866
ANKRD35_chr1_145861564_145890866	0/0	g0027	2	0	0	0	0	2	ANKRD35	chr1	145861564	145890866
ANKRD35_chr1_145861564_145890866	0/0	g0028	2	0	0	2	0	0	ANKRD35	chr1	145861564	145890866
ANKRD35_chr1_145861564_145890866	0/0	g0029	2	2	0	0	0	0	ANKRD35	chr1	145861564	145890866
ANKRD35_chr1_145861564_145890866	0/0	g0030	2	2	0	0	0	0	ANKRD35	chr1	145861564	145890866
ANKRD35_chr1_145861564_145890866	0/0	g0031	2	0	0	2	0	0	ANKRD35	chr1	145861564	145890866
ANKRD35_chr1_145861564_145890866	0/0	g0032	2	0	1	1	0	0	ANKRD35	chr1	145861564	145890866
ANKRD35_chr1_145861564_145890866	0/0	g0033	2	0	0	0	0	2	ANKRD35	chr1	145861564	145890866
ANKRD35_chr1_145861564_145890866	0/0	g0034	2	0	0	2	0	0	ANKRD35	chr1	145861564	145890866
ANKRD35_chr1_145861564_145890866	0/0	g0035	2	1	1	0	0	0	ANKRD35	chr1	145861564	145890866
ANKRD35_chr1_145861564_145890866	0/0	g0036	2	0	0	2	0	0	ANKRD35	chr1	145861564	145890866
ANKRD35_chr1_145861564_145890866	0/0	g0037	2	0	0	2	0	0	ANKRD35	chr1	145861564	145890866
ANKRD35_chr1_145861564_145890866	0/0	g0038	2	2	0	0	0	0	ANKRD35	chr1	145861564	145890866
ANKRD35_chr1_145861564_145890866	0/0	g0039	2	2	0	0	0	0	ANKRD35	chr1	145861564	145890866
ANKRD35_chr1_145861564_145890866	0/0	g0040	2	1	1	0	0	0	ANKRD35	chr1	145861564	145890866
ANKRD35_chr1_145861564_145890866	0/0	g0041	2	0	0	2	0	0	ANKRD35	chr1	145861564	145890866
ANKRD35_chr1_145861564_145890866	0/0	g0042	2	1	1	0	0	0	ANKRD35	chr1	145861564	145890866
ANKRD35_chr1_145861564_145890866	0/0	g0043	2	0	0	2	0	0	ANKRD35	chr1	145861564	145890866
ANKRD35_chr1_145861564_145890866	0/0	g0044	2	0	0	2	0	0	ANKRD35	chr1	145861564	145890866
ANKRD35_chr1_145861564_145890866	0/0	g0045	2	0	0	2	0	0	ANKRD35	chr1	145861564	145890866