JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ANKRD45_chr1_173603336_173674851	0/0	g0275	1	0	0	1	0	0	ANKRD45	chr1	173603336	173674851
ANKRD45_chr1_173603336_173674851	0/0	g0276	1	0	0	0	0	1	ANKRD45	chr1	173603336	173674851
ANKRD45_chr1_173603336_173674851	0/0	g0277	1	0	0	0	0	1	ANKRD45	chr1	173603336	173674851
ANKRD45_chr1_173603336_173674851	0/0	g0278	1	0	1	0	0	0	ANKRD45	chr1	173603336	173674851
ANKRD45_chr1_173603336_173674851	0/0	g0279	1	0	0	0	1	0	ANKRD45	chr1	173603336	173674851
ANKRD45_chr1_173603336_173674851	0/0	g0280	1	0	1	0	0	0	ANKRD45	chr1	173603336	173674851
ANKRD45_chr1_173603336_173674851	0/0	g0281	1	0	1	0	0	0	ANKRD45	chr1	173603336	173674851
ANKRD45_chr1_173603336_173674851	0/0	g0282	1	0	0	1	0	0	ANKRD45	chr1	173603336	173674851
ANKRD45_chr1_173603336_173674851	0/0	g0283	1	0	0	0	1	0	ANKRD45	chr1	173603336	173674851
ANKRD45_chr1_173603336_173674851	0/0	g0284	1	0	0	1	0	0	ANKRD45	chr1	173603336	173674851
ANKRD45_chr1_173603336_173674851	0/0	g0285	1	0	0	1	0	0	ANKRD45	chr1	173603336	173674851
ANKRD45_chr1_173603336_173674851	0/0	g0286	1	0	0	1	0	0	ANKRD45	chr1	173603336	173674851
ANKRD45_chr1_173603336_173674851	0/0	g0287	1	0	0	1	0	0	ANKRD45	chr1	173603336	173674851
ANKRD45_chr1_173603336_173674851	0/0	g0288	1	0	0	1	0	0	ANKRD45	chr1	173603336	173674851
ANKRD45_chr1_173603336_173674851	0/0	g0289	1	0	0	1	0	0	ANKRD45	chr1	173603336	173674851
ANKRD45_chr1_173603336_173674851	0/0	g0290	1	0	0	1	0	0	ANKRD45	chr1	173603336	173674851
ANKRD45_chr1_173603336_173674851	0/0	g0291	1	0	0	0	0	1	ANKRD45	chr1	173603336	173674851
ANKRD45_chr1_173603336_173674851	0/0	g0292	1	1	0	0	0	0	ANKRD45	chr1	173603336	173674851
ANKRD45_chr1_173603336_173674851	0/0	g0293	1	0	0	1	0	0	ANKRD45	chr1	173603336	173674851
ANKRD45_chr1_173603336_173674851	0/0	g0294	1	0	0	0	0	1	ANKRD45	chr1	173603336	173674851
ANKRD45_chr1_173603336_173674851	0/0	g0295	1	0	0	1	0	0	ANKRD45	chr1	173603336	173674851
ANKRD45_chr1_173603336_173674851	0/0	g0296	1	0	0	1	0	0	ANKRD45	chr1	173603336	173674851
ANKRD45_chr1_173603336_173674851	0/0	g0297	1	1	0	0	0	0	ANKRD45	chr1	173603336	173674851
ANKRD45_chr1_173603336_173674851	0/0	g0298	1	1	0	0	0	0	ANKRD45	chr1	173603336	173674851
ANKRD45_chr1_173603336_173674851	0/0	g0299	1	1	0	0	0	0	ANKRD45	chr1	173603336	173674851
ANKRD45_chr1_173603336_173674851	0/0	g0300	1	1	0	0	0	0	ANKRD45	chr1	173603336	173674851
ANKRD45_chr1_173603336_173674851	0/0	g0301	1	0	0	0	0	1	ANKRD45	chr1	173603336	173674851
ANKRD45_chr1_173603336_173674851	0/0	g0302	1	1	0	0	0	0	ANKRD45	chr1	173603336	173674851
ANKRD45_chr1_173603336_173674851	0/0	g0303	1	1	0	0	0	0	ANKRD45	chr1	173603336	173674851
ANKRD45_chr1_173603336_173674851	0/0	g0304	1	1	0	0	0	0	ANKRD45	chr1	173603336	173674851
ANKRD45_chr1_173603336_173674851	0/0	g0305	1	1	0	0	0	0	ANKRD45	chr1	173603336	173674851
ANKRD45_chr1_173603336_173674851	0/0	g0306	1	1	0	0	0	0	ANKRD45	chr1	173603336	173674851
ANKRD45_chr1_173603336_173674851	0/0	g0307	1	1	0	0	0	0	ANKRD45	chr1	173603336	173674851
ANKRD45_chr1_173603336_173674851	0/0	g0308	1	1	0	0	0	0	ANKRD45	chr1	173603336	173674851
ANKRD46_chr8_100515772_100564759	0/0	g0001	13	0	3	10	0	0	ANKRD46	chr8	100515772	100564759
ANKRD46_chr8_100515772_100564759	0/0	g0002	8	1	4	1	2	0	ANKRD46	chr8	100515772	100564759
ANKRD46_chr8_100515772_100564759	0/0	g0003	7	0	3	3	0	1	ANKRD46	chr8	100515772	100564759
ANKRD46_chr8_100515772_100564759	0/0	g0004	6	0	0	6	0	0	ANKRD46	chr8	100515772	100564759
ANKRD46_chr8_100515772_100564759	0/0	g0005	6	0	0	6	0	0	ANKRD46	chr8	100515772	100564759
ANKRD46_chr8_100515772_100564759	0/0	g0006	5	1	1	3	0	0	ANKRD46	chr8	100515772	100564759
ANKRD46_chr8_100515772_100564759	0/0	g0007	5	0	0	5	0	0	ANKRD46	chr8	100515772	100564759
ANKRD46_chr8_100515772_100564759	0/0	g0008	4	0	1	3	0	0	ANKRD46	chr8	100515772	100564759
ANKRD46_chr8_100515772_100564759	0/0	g0009	4	0	1	0	0	3	ANKRD46	chr8	100515772	100564759
ANKRD46_chr8_100515772_100564759	0/0	g0010	3	1	1	0	0	1	ANKRD46	chr8	100515772	100564759
ANKRD46_chr8_100515772_100564759	0/0	g0011	3	0	0	2	0	1	ANKRD46	chr8	100515772	100564759
ANKRD46_chr8_100515772_100564759	0/0	g0012	3	0	0	3	0	0	ANKRD46	chr8	100515772	100564759
ANKRD46_chr8_100515772_100564759	0/0	g0013	3	3	0	0	0	0	ANKRD46	chr8	100515772	100564759
ANKRD46_chr8_100515772_100564759	0/0	g0014	3	0	0	3	0	0	ANKRD46	chr8	100515772	100564759
ANKRD46_chr8_100515772_100564759	0/0	g0015	3	0	3	0	0	0	ANKRD46	chr8	100515772	100564759
ANKRD46_chr8_100515772_100564759	0/0	g0016	3	0	2	0	0	1	ANKRD46	chr8	100515772	100564759