JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ANKRD52_chr12_56232807_56263384	0/0	g0141	1	0	1	0	0	0	ANKRD52	chr12	56232807	56263384
ANKRD52_chr12_56232807_56263384	0/0	g0142	1	0	0	1	0	0	ANKRD52	chr12	56232807	56263384
ANKRD52_chr12_56232807_56263384	0/0	g0143	1	0	0	1	0	0	ANKRD52	chr12	56232807	56263384
ANKRD52_chr12_56232807_56263384	0/0	g0144	1	0	0	1	0	0	ANKRD52	chr12	56232807	56263384
ANKRD52_chr12_56232807_56263384	0/0	g0145	1	0	1	0	0	0	ANKRD52	chr12	56232807	56263384
ANKRD52_chr12_56232807_56263384	0/0	g0146	1	1	0	0	0	0	ANKRD52	chr12	56232807	56263384
ANKRD52_chr12_56232807_56263384	0/0	g0147	1	1	0	0	0	0	ANKRD52	chr12	56232807	56263384
ANKRD52_chr12_56232807_56263384	0/0	g0148	1	1	0	0	0	0	ANKRD52	chr12	56232807	56263384
ANKRD52_chr12_56232807_56263384	0/0	g0149	1	1	0	0	0	0	ANKRD52	chr12	56232807	56263384
ANKRD52_chr12_56232807_56263384	0/0	g0150	1	1	0	0	0	0	ANKRD52	chr12	56232807	56263384
ANKRD52_chr12_56232807_56263384	0/0	g0151	1	1	0	0	0	0	ANKRD52	chr12	56232807	56263384
ANKRD52_chr12_56232807_56263384	0/0	g0152	1	1	0	0	0	0	ANKRD52	chr12	56232807	56263384
ANKRD52_chr12_56232807_56263384	0/0	g0153	1	1	0	0	0	0	ANKRD52	chr12	56232807	56263384
ANKRD52_chr12_56232807_56263384	0/0	g0154	1	1	0	0	0	0	ANKRD52	chr12	56232807	56263384
ANKRD52_chr12_56232807_56263384	0/0	g0155	1	1	0	0	0	0	ANKRD52	chr12	56232807	56263384
ANKRD52_chr12_56232807_56263384	0/0	g0156	1	1	0	0	0	0	ANKRD52	chr12	56232807	56263384
ANKRD52_chr12_56232807_56263384	0/0	g0157	1	1	0	0	0	0	ANKRD52	chr12	56232807	56263384
ANKRD52_chr12_56232807_56263384	0/0	g0158	1	1	0	0	0	0	ANKRD52	chr12	56232807	56263384
ANKRD52_chr12_56232807_56263384	0/0	g0159	1	1	0	0	0	0	ANKRD52	chr12	56232807	56263384
ANKRD52_chr12_56232807_56263384	0/0	g0160	1	1	0	0	0	0	ANKRD52	chr12	56232807	56263384
ANKRD52_chr12_56232807_56263384	0/0	g0161	1	1	0	0	0	0	ANKRD52	chr12	56232807	56263384
ANKRD52_chr12_56232807_56263384	0/0	g0162	1	0	1	0	0	0	ANKRD52	chr12	56232807	56263384
ANKRD52_chr12_56232807_56263384	0/0	g0163	1	1	0	0	0	0	ANKRD52	chr12	56232807	56263384
ANKRD52_chr12_56232807_56263384	0/0	g0164	1	1	0	0	0	0	ANKRD52	chr12	56232807	56263384
ANKRD52_chr12_56232807_56263384	0/0	g0165	1	1	0	0	0	0	ANKRD52	chr12	56232807	56263384
ANKRD52_chr12_56232807_56263384	0/0	g0166	1	1	0	0	0	0	ANKRD52	chr12	56232807	56263384
ANKRD52_chr12_56232807_56263384	0/0	g0167	1	1	0	0	0	0	ANKRD52	chr12	56232807	56263384
ANKRD52_chr12_56232807_56263384	0/0	g0168	1	1	0	0	0	0	ANKRD52	chr12	56232807	56263384
ANKRD52_chr12_56232807_56263384	0/0	g0169	1	1	0	0	0	0	ANKRD52	chr12	56232807	56263384
ANKRD52_chr12_56232807_56263384	0/0	g0170	1	1	0	0	0	0	ANKRD52	chr12	56232807	56263384
ANKRD52_chr12_56232807_56263384	0/0	g0171	1	1	0	0	0	0	ANKRD52	chr12	56232807	56263384
ANKRD52_chr12_56232807_56263384	0/0	g0172	1	1	0	0	0	0	ANKRD52	chr12	56232807	56263384
ANKRD52_chr12_56232807_56263384	0/0	g0173	1	1	0	0	0	0	ANKRD52	chr12	56232807	56263384
ANKRD52_chr12_56232807_56263384	0/0	g0174	1	1	0	0	0	0	ANKRD52	chr12	56232807	56263384
ANKRD52_chr12_56232807_56263384	0/0	g0175	1	1	0	0	0	0	ANKRD52	chr12	56232807	56263384
ANKRD52_chr12_56232807_56263384	0/0	g0176	1	1	0	0	0	0	ANKRD52	chr12	56232807	56263384
ANKRD52_chr12_56232807_56263384	0/0	g0177	1	0	0	1	0	0	ANKRD52	chr12	56232807	56263384
ANKRD52_chr12_56232807_56263384	0/0	g0178	1	0	0	1	0	0	ANKRD52	chr12	56232807	56263384
ANKRD52_chr12_56232807_56263384	1/0	g0179	1	0	0	0	0	0	ANKRD52	chr12	56232807	56263384
ANKRD52_chr12_56232807_56263384	0/1	g0180	1	0	0	0	0	0	ANKRD52	chr12	56232807	56263384
ANKRD52_chr12_56232807_56263384	0/0	g0181	1	0	0	1	0	0	ANKRD52	chr12	56232807	56263384
ANKRD53_chr2_70973630_70990499	1/0	g0001	143	13	28	87	2	12	ANKRD53	chr2	70973630	70990499
ANKRD53_chr2_70973630_70990499	0/1	g0002	92	12	15	45	2	17	ANKRD53	chr2	70973630	70990499
ANKRD53_chr2_70973630_70990499	0/0	g0003	26	0	5	15	2	4	ANKRD53	chr2	70973630	70990499
ANKRD53_chr2_70973630_70990499	0/0	g0004	23	1	18	0	0	4	ANKRD53	chr2	70973630	70990499
ANKRD53_chr2_70973630_70990499	0/0	g0005	15	0	0	14	0	1	ANKRD53	chr2	70973630	70990499
ANKRD53_chr2_70973630_70990499	0/0	g0006	12	5	3	4	0	0	ANKRD53	chr2	70973630	70990499
ANKRD53_chr2_70973630_70990499	0/0	g0007	10	1	0	9	0	0	ANKRD53	chr2	70973630	70990499
ANKRD53_chr2_70973630_70990499	0/0	g0008	8	6	2	0	0	0	ANKRD53	chr2	70973630	70990499
ANKRD53_chr2_70973630_70990499	0/0	g0009	8	8	0	0	0	0	ANKRD53	chr2	70973630	70990499