JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ANO7_chr2_241183677_241230976	0/0	g0349	1	0	0	1	0	0	ANO7	chr2	241183677	241230976
ANO7_chr2_241183677_241230976	0/0	g0350	1	0	0	1	0	0	ANO7	chr2	241183677	241230976
ANO7_chr2_241183677_241230976	0/0	g0351	1	1	0	0	0	0	ANO7	chr2	241183677	241230976
ANO7_chr2_241183677_241230976	0/0	g0352	1	1	0	0	0	0	ANO7	chr2	241183677	241230976
ANO7_chr2_241183677_241230976	0/0	g0353	1	0	0	0	0	1	ANO7	chr2	241183677	241230976
ANO7_chr2_241183677_241230976	0/0	g0354	1	0	0	1	0	0	ANO7	chr2	241183677	241230976
ANO7_chr2_241183677_241230976	0/0	g0355	1	1	0	0	0	0	ANO7	chr2	241183677	241230976
ANO7_chr2_241183677_241230976	0/0	g0356	1	0	1	0	0	0	ANO7	chr2	241183677	241230976
ANO7_chr2_241183677_241230976	0/0	g0357	1	1	0	0	0	0	ANO7	chr2	241183677	241230976
ANO7_chr2_241183677_241230976	0/0	g0358	1	1	0	0	0	0	ANO7	chr2	241183677	241230976
ANO7_chr2_241183677_241230976	0/0	g0359	1	1	0	0	0	0	ANO7	chr2	241183677	241230976
ANO7_chr2_241183677_241230976	0/0	g0360	1	1	0	0	0	0	ANO7	chr2	241183677	241230976
ANO7_chr2_241183677_241230976	0/0	g0361	1	1	0	0	0	0	ANO7	chr2	241183677	241230976
ANO7_chr2_241183677_241230976	0/0	g0362	1	1	0	0	0	0	ANO7	chr2	241183677	241230976
ANO7_chr2_241183677_241230976	0/0	g0363	1	1	0	0	0	0	ANO7	chr2	241183677	241230976
ANO7_chr2_241183677_241230976	0/0	g0364	1	1	0	0	0	0	ANO7	chr2	241183677	241230976
ANO7_chr2_241183677_241230976	0/0	g0365	1	1	0	0	0	0	ANO7	chr2	241183677	241230976
ANO7_chr2_241183677_241230976	0/0	g0366	1	0	1	0	0	0	ANO7	chr2	241183677	241230976
ANO7_chr2_241183677_241230976	0/0	g0367	1	1	0	0	0	0	ANO7	chr2	241183677	241230976
ANO7_chr2_241183677_241230976	0/0	g0368	1	1	0	0	0	0	ANO7	chr2	241183677	241230976
ANO7_chr2_241183677_241230976	0/0	g0369	1	0	0	1	0	0	ANO7	chr2	241183677	241230976
ANO7_chr2_241183677_241230976	0/0	g0370	1	0	0	1	0	0	ANO7	chr2	241183677	241230976
ANO7_chr2_241183677_241230976	0/0	g0371	1	0	0	1	0	0	ANO7	chr2	241183677	241230976
ANO7_chr2_241183677_241230976	0/0	g0372	1	0	0	1	0	0	ANO7	chr2	241183677	241230976
ANO7_chr2_241183677_241230976	0/0	g0373	1	0	0	1	0	0	ANO7	chr2	241183677	241230976
ANO7_chr2_241183677_241230976	0/0	g0374	1	0	0	1	0	0	ANO7	chr2	241183677	241230976
ANO7_chr2_241183677_241230976	0/0	g0375	1	0	0	1	0	0	ANO7	chr2	241183677	241230976
ANO7_chr2_241183677_241230976	0/0	g0376	1	0	0	1	0	0	ANO7	chr2	241183677	241230976
ANO7_chr2_241183677_241230976	0/0	g0377	1	1	0	0	0	0	ANO7	chr2	241183677	241230976
ANO7_chr2_241183677_241230976	0/0	g0378	1	0	0	0	0	1	ANO7	chr2	241183677	241230976
ANO8_chr19_17318223_17339855	0/0	g0001	53	0	12	34	0	7	ANO8	chr19	17318223	17339855
ANO8_chr19_17318223_17339855	0/0	g0002	22	11	1	10	0	0	ANO8	chr19	17318223	17339855
ANO8_chr19_17318223_17339855	0/0	g0003	16	1	7	5	2	1	ANO8	chr19	17318223	17339855
ANO8_chr19_17318223_17339855	0/0	g0004	14	0	5	7	0	2	ANO8	chr19	17318223	17339855
ANO8_chr19_17318223_17339855	0/0	g0005	10	0	1	7	2	0	ANO8	chr19	17318223	17339855
ANO8_chr19_17318223_17339855	0/0	g0006	10	1	3	1	0	5	ANO8	chr19	17318223	17339855
ANO8_chr19_17318223_17339855	0/0	g0007	10	1	5	1	0	3	ANO8	chr19	17318223	17339855
ANO8_chr19_17318223_17339855	0/0	g0008	9	3	2	0	1	3	ANO8	chr19	17318223	17339855
ANO8_chr19_17318223_17339855	0/0	g0009	8	7	1	0	0	0	ANO8	chr19	17318223	17339855
ANO8_chr19_17318223_17339855	0/0	g0010	6	6	0	0	0	0	ANO8	chr19	17318223	17339855
ANO8_chr19_17318223_17339855	0/0	g0011	6	0	3	3	0	0	ANO8	chr19	17318223	17339855
ANO8_chr19_17318223_17339855	0/0	g0012	5	0	0	4	1	0	ANO8	chr19	17318223	17339855
ANO8_chr19_17318223_17339855	0/0	g0013	5	5	0	0	0	0	ANO8	chr19	17318223	17339855
ANO8_chr19_17318223_17339855	0/0	g0014	4	0	0	4	0	0	ANO8	chr19	17318223	17339855
ANO8_chr19_17318223_17339855	0/0	g0015	4	0	0	4	0	0	ANO8	chr19	17318223	17339855
ANO8_chr19_17318223_17339855	0/0	g0016	4	0	2	0	2	0	ANO8	chr19	17318223	17339855
ANO8_chr19_17318223_17339855	0/0	g0017	4	2	2	0	0	0	ANO8	chr19	17318223	17339855
ANO8_chr19_17318223_17339855	0/0	g0018	4	0	0	4	0	0	ANO8	chr19	17318223	17339855
ANO8_chr19_17318223_17339855	0/0	g0019	4	2	1	0	1	0	ANO8	chr19	17318223	17339855
ANO8_chr19_17318223_17339855	0/0	g0020	3	0	0	0	1	2	ANO8	chr19	17318223	17339855