JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ANP32A_chr15_68773535_68825895	0/0	g0320	1	0	0	1	0	0	ANP32A	chr15	68773535	68825895
ANP32A_chr15_68773535_68825895	0/0	g0321	1	0	1	0	0	0	ANP32A	chr15	68773535	68825895
ANP32A_chr15_68773535_68825895	0/0	g0322	1	1	0	0	0	0	ANP32A	chr15	68773535	68825895
ANP32A_chr15_68773535_68825895	0/0	g0323	1	1	0	0	0	0	ANP32A	chr15	68773535	68825895
ANP32A_chr15_68773535_68825895	0/0	g0324	1	0	1	0	0	0	ANP32A	chr15	68773535	68825895
ANP32A_chr15_68773535_68825895	0/0	g0325	1	0	0	1	0	0	ANP32A	chr15	68773535	68825895
ANP32B_chr9_97978341_98020943	0/0	g0001	17	1	3	9	2	2	ANP32B	chr9	97978341	98020943
ANP32B_chr9_97978341_98020943	0/0	g0002	9	2	0	5	1	1	ANP32B	chr9	97978341	98020943
ANP32B_chr9_97978341_98020943	0/0	g0003	8	7	1	0	0	0	ANP32B	chr9	97978341	98020943
ANP32B_chr9_97978341_98020943	0/0	g0004	7	0	0	7	0	0	ANP32B	chr9	97978341	98020943
ANP32B_chr9_97978341_98020943	0/0	g0005	6	5	0	1	0	0	ANP32B	chr9	97978341	98020943
ANP32B_chr9_97978341_98020943	0/0	g0006	6	1	4	0	0	1	ANP32B	chr9	97978341	98020943
ANP32B_chr9_97978341_98020943	0/0	g0007	5	5	0	0	0	0	ANP32B	chr9	97978341	98020943
ANP32B_chr9_97978341_98020943	0/0	g0008	5	0	0	5	0	0	ANP32B	chr9	97978341	98020943
ANP32B_chr9_97978341_98020943	0/0	g0009	5	0	1	3	0	1	ANP32B	chr9	97978341	98020943
ANP32B_chr9_97978341_98020943	0/0	g0010	5	0	0	5	0	0	ANP32B	chr9	97978341	98020943
ANP32B_chr9_97978341_98020943	0/0	g0011	4	0	2	0	2	0	ANP32B	chr9	97978341	98020943
ANP32B_chr9_97978341_98020943	0/0	g0012	3	3	0	0	0	0	ANP32B	chr9	97978341	98020943
ANP32B_chr9_97978341_98020943	0/0	g0013	3	0	0	3	0	0	ANP32B	chr9	97978341	98020943
ANP32B_chr9_97978341_98020943	0/0	g0014	3	0	0	3	0	0	ANP32B	chr9	97978341	98020943
ANP32B_chr9_97978341_98020943	0/0	g0015	3	0	2	0	1	0	ANP32B	chr9	97978341	98020943
ANP32B_chr9_97978341_98020943	0/0	g0016	3	0	0	3	0	0	ANP32B	chr9	97978341	98020943
ANP32B_chr9_97978341_98020943	0/0	g0017	3	0	2	1	0	0	ANP32B	chr9	97978341	98020943
ANP32B_chr9_97978341_98020943	0/0	g0018	3	0	1	1	0	1	ANP32B	chr9	97978341	98020943
ANP32B_chr9_97978341_98020943	0/0	g0019	3	0	0	3	0	0	ANP32B	chr9	97978341	98020943
ANP32B_chr9_97978341_98020943	0/0	g0020	3	0	2	1	0	0	ANP32B	chr9	97978341	98020943
ANP32B_chr9_97978341_98020943	0/0	g0021	2	2	0	0	0	0	ANP32B	chr9	97978341	98020943
ANP32B_chr9_97978341_98020943	0/0	g0022	2	0	0	2	0	0	ANP32B	chr9	97978341	98020943
ANP32B_chr9_97978341_98020943	0/0	g0023	2	0	0	2	0	0	ANP32B	chr9	97978341	98020943
ANP32B_chr9_97978341_98020943	0/0	g0024	2	0	1	1	0	0	ANP32B	chr9	97978341	98020943
ANP32B_chr9_97978341_98020943	0/0	g0025	2	0	0	2	0	0	ANP32B	chr9	97978341	98020943
ANP32B_chr9_97978341_98020943	0/0	g0026	2	0	1	1	0	0	ANP32B	chr9	97978341	98020943
ANP32B_chr9_97978341_98020943	0/0	g0027	2	0	2	0	0	0	ANP32B	chr9	97978341	98020943
ANP32B_chr9_97978341_98020943	0/0	g0028	2	0	1	0	0	1	ANP32B	chr9	97978341	98020943
ANP32B_chr9_97978341_98020943	0/1	g0029	2	0	1	0	0	0	ANP32B	chr9	97978341	98020943
ANP32B_chr9_97978341_98020943	0/0	g0030	2	0	0	0	0	2	ANP32B	chr9	97978341	98020943
ANP32B_chr9_97978341_98020943	0/0	g0031	2	2	0	0	0	0	ANP32B	chr9	97978341	98020943
ANP32B_chr9_97978341_98020943	0/0	g0032	2	0	1	0	0	1	ANP32B	chr9	97978341	98020943
ANP32B_chr9_97978341_98020943	0/0	g0033	2	1	0	0	1	0	ANP32B	chr9	97978341	98020943
ANP32B_chr9_97978341_98020943	0/0	g0034	2	2	0	0	0	0	ANP32B	chr9	97978341	98020943
ANP32B_chr9_97978341_98020943	0/0	g0035	2	2	0	0	0	0	ANP32B	chr9	97978341	98020943
ANP32B_chr9_97978341_98020943	0/0	g0036	2	2	0	0	0	0	ANP32B	chr9	97978341	98020943
ANP32B_chr9_97978341_98020943	0/0	g0037	2	2	0	0	0	0	ANP32B	chr9	97978341	98020943
ANP32B_chr9_97978341_98020943	0/0	g0038	1	1	0	0	0	0	ANP32B	chr9	97978341	98020943
ANP32B_chr9_97978341_98020943	0/0	g0039	1	1	0	0	0	0	ANP32B	chr9	97978341	98020943
ANP32B_chr9_97978341_98020943	0/0	g0040	1	1	0	0	0	0	ANP32B	chr9	97978341	98020943
ANP32B_chr9_97978341_98020943	0/0	g0041	1	1	0	0	0	0	ANP32B	chr9	97978341	98020943
ANP32B_chr9_97978341_98020943	0/0	g0042	1	1	0	0	0	0	ANP32B	chr9	97978341	98020943
ANP32B_chr9_97978341_98020943	0/0	g0043	1	1	0	0	0	0	ANP32B	chr9	97978341	98020943
ANP32B_chr9_97978341_98020943	0/0	g0044	1	1	0	0	0	0	ANP32B	chr9	97978341	98020943