JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ANXA8L1_chr10_46370776_46396778	0/0	g0118	1	0	1	0	0	0	ANXA8L1	chr10	46370776	46396778
ANXA8L1_chr10_46370776_46396778	0/0	g0119	1	0	0	0	0	1	ANXA8L1	chr10	46370776	46396778
ANXA8L1_chr10_46370776_46396778	0/0	g0120	1	0	0	1	0	0	ANXA8L1	chr10	46370776	46396778
ANXA8L1_chr10_46370776_46396778	0/0	g0121	1	0	1	0	0	0	ANXA8L1	chr10	46370776	46396778
ANXA8L1_chr10_46370776_46396778	0/0	g0122	1	1	0	0	0	0	ANXA8L1	chr10	46370776	46396778
ANXA8L1_chr10_46370776_46396778	0/0	g0123	1	0	1	0	0	0	ANXA8L1	chr10	46370776	46396778
ANXA8L1_chr10_46370776_46396778	0/0	g0124	1	0	1	0	0	0	ANXA8L1	chr10	46370776	46396778
ANXA8L1_chr10_46370776_46396778	0/0	g0125	1	1	0	0	0	0	ANXA8L1	chr10	46370776	46396778
ANXA8L1_chr10_46370776_46396778	0/0	g0126	1	0	0	1	0	0	ANXA8L1	chr10	46370776	46396778
ANXA8L1_chr10_46370776_46396778	0/0	g0127	1	0	0	0	0	1	ANXA8L1	chr10	46370776	46396778
ANXA8L1_chr10_46370776_46396778	0/0	g0128	1	1	0	0	0	0	ANXA8L1	chr10	46370776	46396778
ANXA8L1_chr10_46370776_46396778	0/0	g0129	1	0	1	0	0	0	ANXA8L1	chr10	46370776	46396778
ANXA8L1_chr10_46370776_46396778	0/0	g0130	1	1	0	0	0	0	ANXA8L1	chr10	46370776	46396778
ANXA8L1_chr10_46370776_46396778	0/0	g0131	1	1	0	0	0	0	ANXA8L1	chr10	46370776	46396778
ANXA8L1_chr10_46370776_46396778	0/0	g0132	1	1	0	0	0	0	ANXA8L1	chr10	46370776	46396778
ANXA8L1_chr10_46370776_46396778	0/0	g0133	1	0	0	0	0	1	ANXA8L1	chr10	46370776	46396778
ANXA8L1_chr10_46370776_46396778	0/0	g0134	1	0	0	0	1	0	ANXA8L1	chr10	46370776	46396778
ANXA8L1_chr10_46370776_46396778	0/0	g0135	1	1	0	0	0	0	ANXA8L1	chr10	46370776	46396778
ANXA8L1_chr10_46370776_46396778	0/0	g0136	1	0	1	0	0	0	ANXA8L1	chr10	46370776	46396778
ANXA8L1_chr10_46370776_46396778	0/0	g0137	1	1	0	0	0	0	ANXA8L1	chr10	46370776	46396778
ANXA8L1_chr10_46370776_46396778	0/0	g0138	1	1	0	0	0	0	ANXA8L1	chr10	46370776	46396778
ANXA8L1_chr10_46370776_46396778	0/0	g0139	1	1	0	0	0	0	ANXA8L1	chr10	46370776	46396778
ANXA8_chr10_47462993_47489115	0/0	g0001	42	1	4	32	1	4	ANXA8	chr10	47462993	47489115
ANXA8_chr10_47462993_47489115	0/0	g0002	36	2	11	15	1	7	ANXA8	chr10	47462993	47489115
ANXA8_chr10_47462993_47489115	0/0	g0003	20	0	1	19	0	0	ANXA8	chr10	47462993	47489115
ANXA8_chr10_47462993_47489115	0/0	g0004	13	0	0	12	0	1	ANXA8	chr10	47462993	47489115
ANXA8_chr10_47462993_47489115	1/1	g0005	9	1	2	1	3	0	ANXA8	chr10	47462993	47489115
ANXA8_chr10_47462993_47489115	0/0	g0006	9	0	0	9	0	0	ANXA8	chr10	47462993	47489115
ANXA8_chr10_47462993_47489115	0/0	g0007	6	0	0	5	1	0	ANXA8	chr10	47462993	47489115
ANXA8_chr10_47462993_47489115	0/0	g0008	6	3	0	1	1	1	ANXA8	chr10	47462993	47489115
ANXA8_chr10_47462993_47489115	0/0	g0009	6	4	2	0	0	0	ANXA8	chr10	47462993	47489115
ANXA8_chr10_47462993_47489115	0/0	g0010	6	5	1	0	0	0	ANXA8	chr10	47462993	47489115
ANXA8_chr10_47462993_47489115	0/0	g0011	5	0	0	5	0	0	ANXA8	chr10	47462993	47489115
ANXA8_chr10_47462993_47489115	0/0	g0012	5	5	0	0	0	0	ANXA8	chr10	47462993	47489115
ANXA8_chr10_47462993_47489115	0/0	g0013	5	5	0	0	0	0	ANXA8	chr10	47462993	47489115
ANXA8_chr10_47462993_47489115	0/0	g0014	5	0	2	0	1	2	ANXA8	chr10	47462993	47489115
ANXA8_chr10_47462993_47489115	0/0	g0015	4	4	0	0	0	0	ANXA8	chr10	47462993	47489115
ANXA8_chr10_47462993_47489115	0/0	g0016	4	0	4	0	0	0	ANXA8	chr10	47462993	47489115
ANXA8_chr10_47462993_47489115	0/0	g0017	4	0	0	4	0	0	ANXA8	chr10	47462993	47489115
ANXA8_chr10_47462993_47489115	0/0	g0018	4	0	0	4	0	0	ANXA8	chr10	47462993	47489115
ANXA8_chr10_47462993_47489115	0/0	g0019	4	0	0	4	0	0	ANXA8	chr10	47462993	47489115
ANXA8_chr10_47462993_47489115	0/0	g0020	4	0	0	4	0	0	ANXA8	chr10	47462993	47489115
ANXA8_chr10_47462993_47489115	0/0	g0021	4	0	0	4	0	0	ANXA8	chr10	47462993	47489115
ANXA8_chr10_47462993_47489115	0/0	g0022	4	1	2	1	0	0	ANXA8	chr10	47462993	47489115
ANXA8_chr10_47462993_47489115	0/0	g0023	3	3	0	0	0	0	ANXA8	chr10	47462993	47489115
ANXA8_chr10_47462993_47489115	0/0	g0024	3	0	0	3	0	0	ANXA8	chr10	47462993	47489115
ANXA8_chr10_47462993_47489115	0/0	g0025	3	0	0	3	0	0	ANXA8	chr10	47462993	47489115
ANXA8_chr10_47462993_47489115	0/0	g0026	3	0	3	0	0	0	ANXA8	chr10	47462993	47489115
ANXA8_chr10_47462993_47489115	0/0	g0027	3	0	0	3	0	0	ANXA8	chr10	47462993	47489115
ANXA8_chr10_47462993_47489115	0/0	g0028	3	0	1	0	2	0	ANXA8	chr10	47462993	47489115