JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
AOAH_chr7_36507941_36729494	0/0	g0292	1	1	0	0	0	0	AOAH	chr7	36507941	36729494
AOAH_chr7_36507941_36729494	0/0	g0293	1	1	0	0	0	0	AOAH	chr7	36507941	36729494
AOAH_chr7_36507941_36729494	0/0	g0294	1	0	0	0	1	0	AOAH	chr7	36507941	36729494
AOAH_chr7_36507941_36729494	0/0	g0295	1	0	1	0	0	0	AOAH	chr7	36507941	36729494
AOAH_chr7_36507941_36729494	0/0	g0296	1	0	0	0	1	0	AOAH	chr7	36507941	36729494
AOAH_chr7_36507941_36729494	1/0	g0297	1	0	0	0	0	0	AOAH	chr7	36507941	36729494
AOAH_chr7_36507941_36729494	0/0	g0298	1	0	1	0	0	0	AOAH	chr7	36507941	36729494
AOAH_chr7_36507941_36729494	0/0	g0299	1	0	1	0	0	0	AOAH	chr7	36507941	36729494
AOAH_chr7_36507941_36729494	0/0	g0300	1	0	0	0	0	1	AOAH	chr7	36507941	36729494
AOAH_chr7_36507941_36729494	0/0	g0301	1	0	0	0	0	1	AOAH	chr7	36507941	36729494
AOAH_chr7_36507941_36729494	0/0	g0302	1	0	0	1	0	0	AOAH	chr7	36507941	36729494
AOAH_chr7_36507941_36729494	0/0	g0303	1	0	1	0	0	0	AOAH	chr7	36507941	36729494
AOAH_chr7_36507941_36729494	0/0	g0304	1	0	0	0	0	1	AOAH	chr7	36507941	36729494
AOAH_chr7_36507941_36729494	0/0	g0305	1	0	0	1	0	0	AOAH	chr7	36507941	36729494
AOAH_chr7_36507941_36729494	0/0	g0306	1	0	1	0	0	0	AOAH	chr7	36507941	36729494
AOC1_chr7_150847517_150866504	0/0	g0001	50	6	9	29	3	3	AOC1	chr7	150847517	150866504
AOC1_chr7_150847517_150866504	0/0	g0002	31	4	10	17	0	0	AOC1	chr7	150847517	150866504
AOC1_chr7_150847517_150866504	0/0	g0003	18	0	7	5	0	6	AOC1	chr7	150847517	150866504
AOC1_chr7_150847517_150866504	0/0	g0004	13	3	0	10	0	0	AOC1	chr7	150847517	150866504
AOC1_chr7_150847517_150866504	0/0	g0005	13	0	0	13	0	0	AOC1	chr7	150847517	150866504
AOC1_chr7_150847517_150866504	0/0	g0006	12	0	3	8	0	1	AOC1	chr7	150847517	150866504
AOC1_chr7_150847517_150866504	0/0	g0007	10	1	4	3	0	2	AOC1	chr7	150847517	150866504
AOC1_chr7_150847517_150866504	0/0	g0008	8	0	7	0	0	1	AOC1	chr7	150847517	150866504
AOC1_chr7_150847517_150866504	0/0	g0009	8	1	1	5	0	1	AOC1	chr7	150847517	150866504
AOC1_chr7_150847517_150866504	0/0	g0010	8	0	1	7	0	0	AOC1	chr7	150847517	150866504
AOC1_chr7_150847517_150866504	0/0	g0011	7	0	2	4	0	1	AOC1	chr7	150847517	150866504
AOC1_chr7_150847517_150866504	0/0	g0012	7	1	2	4	0	0	AOC1	chr7	150847517	150866504
AOC1_chr7_150847517_150866504	0/0	g0013	6	0	2	4	0	0	AOC1	chr7	150847517	150866504
AOC1_chr7_150847517_150866504	0/0	g0014	5	0	2	0	1	2	AOC1	chr7	150847517	150866504
AOC1_chr7_150847517_150866504	0/0	g0015	5	5	0	0	0	0	AOC1	chr7	150847517	150866504
AOC1_chr7_150847517_150866504	0/0	g0016	5	4	1	0	0	0	AOC1	chr7	150847517	150866504
AOC1_chr7_150847517_150866504	0/0	g0017	5	0	1	4	0	0	AOC1	chr7	150847517	150866504
AOC1_chr7_150847517_150866504	0/0	g0018	5	5	0	0	0	0	AOC1	chr7	150847517	150866504
AOC1_chr7_150847517_150866504	0/0	g0019	4	3	1	0	0	0	AOC1	chr7	150847517	150866504
AOC1_chr7_150847517_150866504	0/0	g0020	4	0	0	2	0	2	AOC1	chr7	150847517	150866504
AOC1_chr7_150847517_150866504	0/0	g0021	4	4	0	0	0	0	AOC1	chr7	150847517	150866504
AOC1_chr7_150847517_150866504	0/0	g0022	4	4	0	0	0	0	AOC1	chr7	150847517	150866504
AOC1_chr7_150847517_150866504	0/0	g0023	4	0	2	0	2	0	AOC1	chr7	150847517	150866504
AOC1_chr7_150847517_150866504	0/0	g0024	4	0	0	4	0	0	AOC1	chr7	150847517	150866504
AOC1_chr7_150847517_150866504	0/0	g0025	4	0	1	0	1	2	AOC1	chr7	150847517	150866504
AOC1_chr7_150847517_150866504	0/0	g0026	4	0	2	2	0	0	AOC1	chr7	150847517	150866504
AOC1_chr7_150847517_150866504	0/0	g0027	4	1	0	1	0	2	AOC1	chr7	150847517	150866504
AOC1_chr7_150847517_150866504	0/0	g0028	4	0	0	0	0	4	AOC1	chr7	150847517	150866504
AOC1_chr7_150847517_150866504	0/0	g0029	3	1	1	0	0	1	AOC1	chr7	150847517	150866504
AOC1_chr7_150847517_150866504	0/0	g0030	3	3	0	0	0	0	AOC1	chr7	150847517	150866504
AOC1_chr7_150847517_150866504	0/0	g0031	3	0	1	2	0	0	AOC1	chr7	150847517	150866504
AOC1_chr7_150847517_150866504	0/0	g0032	3	0	1	1	0	1	AOC1	chr7	150847517	150866504
AOC1_chr7_150847517_150866504	0/0	g0033	3	0	2	1	0	0	AOC1	chr7	150847517	150866504
AOC1_chr7_150847517_150866504	0/0	g0034	3	1	0	2	0	0	AOC1	chr7	150847517	150866504
AOC1_chr7_150847517_150866504	0/0	g0035	3	0	0	3	0	0	AOC1	chr7	150847517	150866504