JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
AOX1_chr2_200581014_200676495	0/0	g0356	1	0	0	1	0	0	AOX1	chr2	200581014	200676495
AOX1_chr2_200581014_200676495	0/0	g0357	1	0	0	1	0	0	AOX1	chr2	200581014	200676495
AOX1_chr2_200581014_200676495	0/0	g0358	1	0	0	0	0	1	AOX1	chr2	200581014	200676495
AOX1_chr2_200581014_200676495	0/0	g0359	1	0	0	1	0	0	AOX1	chr2	200581014	200676495
AOX1_chr2_200581014_200676495	0/0	g0360	1	0	0	1	0	0	AOX1	chr2	200581014	200676495
AOX1_chr2_200581014_200676495	0/0	g0361	1	1	0	0	0	0	AOX1	chr2	200581014	200676495
AOX1_chr2_200581014_200676495	0/0	g0362	1	1	0	0	0	0	AOX1	chr2	200581014	200676495
AOX1_chr2_200581014_200676495	0/0	g0363	1	0	0	1	0	0	AOX1	chr2	200581014	200676495
AOX1_chr2_200581014_200676495	0/0	g0364	1	0	0	0	0	1	AOX1	chr2	200581014	200676495
AOX1_chr2_200581014_200676495	0/0	g0365	1	0	1	0	0	0	AOX1	chr2	200581014	200676495
AOX1_chr2_200581014_200676495	0/0	g0366	1	1	0	0	0	0	AOX1	chr2	200581014	200676495
AOX1_chr2_200581014_200676495	0/0	g0367	1	0	1	0	0	0	AOX1	chr2	200581014	200676495
AP1AR_chr4_112226787_112278110	0/0	g0001	34	0	1	33	0	0	AP1AR	chr4	112226787	112278110
AP1AR_chr4_112226787_112278110	0/0	g0002	29	1	11	11	1	5	AP1AR	chr4	112226787	112278110
AP1AR_chr4_112226787_112278110	0/0	g0003	19	2	6	8	1	2	AP1AR	chr4	112226787	112278110
AP1AR_chr4_112226787_112278110	0/0	g0004	18	0	0	18	0	0	AP1AR	chr4	112226787	112278110
AP1AR_chr4_112226787_112278110	0/0	g0005	15	1	0	13	0	1	AP1AR	chr4	112226787	112278110
AP1AR_chr4_112226787_112278110	0/0	g0006	13	0	1	11	0	1	AP1AR	chr4	112226787	112278110
AP1AR_chr4_112226787_112278110	0/0	g0007	11	5	2	3	1	0	AP1AR	chr4	112226787	112278110
AP1AR_chr4_112226787_112278110	0/0	g0008	9	0	5	0	3	1	AP1AR	chr4	112226787	112278110
AP1AR_chr4_112226787_112278110	0/0	g0009	8	0	8	0	0	0	AP1AR	chr4	112226787	112278110
AP1AR_chr4_112226787_112278110	0/1	g0010	6	0	3	2	0	0	AP1AR	chr4	112226787	112278110
AP1AR_chr4_112226787_112278110	0/0	g0011	5	0	0	5	0	0	AP1AR	chr4	112226787	112278110
AP1AR_chr4_112226787_112278110	0/0	g0012	5	4	1	0	0	0	AP1AR	chr4	112226787	112278110
AP1AR_chr4_112226787_112278110	0/0	g0013	5	0	3	1	0	1	AP1AR	chr4	112226787	112278110
AP1AR_chr4_112226787_112278110	0/0	g0014	4	0	0	4	0	0	AP1AR	chr4	112226787	112278110
AP1AR_chr4_112226787_112278110	0/0	g0015	4	0	0	4	0	0	AP1AR	chr4	112226787	112278110
AP1AR_chr4_112226787_112278110	0/0	g0016	4	0	0	4	0	0	AP1AR	chr4	112226787	112278110
AP1AR_chr4_112226787_112278110	0/0	g0017	4	1	3	0	0	0	AP1AR	chr4	112226787	112278110
AP1AR_chr4_112226787_112278110	0/0	g0018	3	0	0	3	0	0	AP1AR	chr4	112226787	112278110
AP1AR_chr4_112226787_112278110	0/0	g0019	3	0	0	3	0	0	AP1AR	chr4	112226787	112278110
AP1AR_chr4_112226787_112278110	0/0	g0020	3	0	0	3	0	0	AP1AR	chr4	112226787	112278110
AP1AR_chr4_112226787_112278110	0/0	g0021	3	2	1	0	0	0	AP1AR	chr4	112226787	112278110
AP1AR_chr4_112226787_112278110	0/0	g0022	3	0	0	3	0	0	AP1AR	chr4	112226787	112278110
AP1AR_chr4_112226787_112278110	0/0	g0023	3	0	3	0	0	0	AP1AR	chr4	112226787	112278110
AP1AR_chr4_112226787_112278110	0/0	g0024	3	2	1	0	0	0	AP1AR	chr4	112226787	112278110
AP1AR_chr4_112226787_112278110	0/0	g0025	3	3	0	0	0	0	AP1AR	chr4	112226787	112278110
AP1AR_chr4_112226787_112278110	0/0	g0026	3	0	0	3	0	0	AP1AR	chr4	112226787	112278110
AP1AR_chr4_112226787_112278110	0/0	g0027	2	0	0	2	0	0	AP1AR	chr4	112226787	112278110
AP1AR_chr4_112226787_112278110	0/0	g0028	2	0	1	0	0	1	AP1AR	chr4	112226787	112278110
AP1AR_chr4_112226787_112278110	0/0	g0029	2	0	0	2	0	0	AP1AR	chr4	112226787	112278110
AP1AR_chr4_112226787_112278110	0/0	g0030	2	2	0	0	0	0	AP1AR	chr4	112226787	112278110
AP1AR_chr4_112226787_112278110	0/0	g0031	2	2	0	0	0	0	AP1AR	chr4	112226787	112278110
AP1AR_chr4_112226787_112278110	0/0	g0032	2	0	1	0	1	0	AP1AR	chr4	112226787	112278110
AP1AR_chr4_112226787_112278110	0/0	g0033	2	0	2	0	0	0	AP1AR	chr4	112226787	112278110
AP1AR_chr4_112226787_112278110	0/0	g0034	2	0	1	0	0	1	AP1AR	chr4	112226787	112278110
AP1AR_chr4_112226787_112278110	0/0	g0035	2	0	0	2	0	0	AP1AR	chr4	112226787	112278110
AP1AR_chr4_112226787_112278110	1/0	g0036	2	0	0	1	0	0	AP1AR	chr4	112226787	112278110
AP1AR_chr4_112226787_112278110	0/0	g0037	2	2	0	0	0	0	AP1AR	chr4	112226787	112278110
AP1AR_chr4_112226787_112278110	0/0	g0038	2	2	0	0	0	0	AP1AR	chr4	112226787	112278110