JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
AP4E1_chr15_50903683_51010895	0/0	g0388	1	0	0	0	0	1	AP4E1	chr15	50903683	51010895
AP4M1_chr7_100096643_100114039	0/0	g0001	82	6	16	51	2	7	AP4M1	chr7	100096643	100114039
AP4M1_chr7_100096643_100114039	0/0	g0002	55	0	5	38	4	8	AP4M1	chr7	100096643	100114039
AP4M1_chr7_100096643_100114039	0/0	g0003	32	0	9	17	2	4	AP4M1	chr7	100096643	100114039
AP4M1_chr7_100096643_100114039	0/1	g0004	30	7	13	0	5	4	AP4M1	chr7	100096643	100114039
AP4M1_chr7_100096643_100114039	0/0	g0005	19	2	2	11	1	3	AP4M1	chr7	100096643	100114039
AP4M1_chr7_100096643_100114039	0/0	g0006	13	2	2	5	0	4	AP4M1	chr7	100096643	100114039
AP4M1_chr7_100096643_100114039	1/0	g0007	12	10	0	0	1	0	AP4M1	chr7	100096643	100114039
AP4M1_chr7_100096643_100114039	0/0	g0008	11	0	1	9	0	1	AP4M1	chr7	100096643	100114039
AP4M1_chr7_100096643_100114039	0/0	g0009	8	0	0	8	0	0	AP4M1	chr7	100096643	100114039
AP4M1_chr7_100096643_100114039	0/0	g0010	7	0	1	3	1	2	AP4M1	chr7	100096643	100114039
AP4M1_chr7_100096643_100114039	0/0	g0011	7	5	0	0	0	2	AP4M1	chr7	100096643	100114039
AP4M1_chr7_100096643_100114039	0/0	g0012	7	5	2	0	0	0	AP4M1	chr7	100096643	100114039
AP4M1_chr7_100096643_100114039	0/0	g0013	6	0	0	6	0	0	AP4M1	chr7	100096643	100114039
AP4M1_chr7_100096643_100114039	0/0	g0014	5	1	1	1	0	2	AP4M1	chr7	100096643	100114039
AP4M1_chr7_100096643_100114039	0/0	g0015	5	4	1	0	0	0	AP4M1	chr7	100096643	100114039
AP4M1_chr7_100096643_100114039	0/0	g0016	5	5	0	0	0	0	AP4M1	chr7	100096643	100114039
AP4M1_chr7_100096643_100114039	0/0	g0017	4	0	1	3	0	0	AP4M1	chr7	100096643	100114039
AP4M1_chr7_100096643_100114039	0/0	g0018	4	4	0	0	0	0	AP4M1	chr7	100096643	100114039
AP4M1_chr7_100096643_100114039	0/0	g0019	4	0	0	4	0	0	AP4M1	chr7	100096643	100114039
AP4M1_chr7_100096643_100114039	0/0	g0020	4	2	0	1	0	1	AP4M1	chr7	100096643	100114039
AP4M1_chr7_100096643_100114039	0/0	g0021	4	4	0	0	0	0	AP4M1	chr7	100096643	100114039
AP4M1_chr7_100096643_100114039	0/0	g0022	4	4	0	0	0	0	AP4M1	chr7	100096643	100114039
AP4M1_chr7_100096643_100114039	0/0	g0023	3	0	0	3	0	0	AP4M1	chr7	100096643	100114039
AP4M1_chr7_100096643_100114039	0/0	g0024	3	0	2	1	0	0	AP4M1	chr7	100096643	100114039
AP4M1_chr7_100096643_100114039	0/0	g0025	3	2	0	1	0	0	AP4M1	chr7	100096643	100114039
AP4M1_chr7_100096643_100114039	0/0	g0026	3	3	0	0	0	0	AP4M1	chr7	100096643	100114039
AP4M1_chr7_100096643_100114039	0/0	g0027	3	0	0	3	0	0	AP4M1	chr7	100096643	100114039
AP4M1_chr7_100096643_100114039	0/0	g0028	3	0	2	1	0	0	AP4M1	chr7	100096643	100114039
AP4M1_chr7_100096643_100114039	0/0	g0029	2	0	1	1	0	0	AP4M1	chr7	100096643	100114039
AP4M1_chr7_100096643_100114039	0/0	g0030	2	0	0	2	0	0	AP4M1	chr7	100096643	100114039
AP4M1_chr7_100096643_100114039	0/0	g0031	2	0	0	0	0	2	AP4M1	chr7	100096643	100114039
AP4M1_chr7_100096643_100114039	0/0	g0032	2	2	0	0	0	0	AP4M1	chr7	100096643	100114039
AP4M1_chr7_100096643_100114039	0/0	g0033	2	2	0	0	0	0	AP4M1	chr7	100096643	100114039
AP4M1_chr7_100096643_100114039	0/0	g0034	2	0	0	0	0	2	AP4M1	chr7	100096643	100114039
AP4M1_chr7_100096643_100114039	0/0	g0035	2	0	1	1	0	0	AP4M1	chr7	100096643	100114039
AP4M1_chr7_100096643_100114039	0/0	g0036	2	0	0	0	1	1	AP4M1	chr7	100096643	100114039
AP4M1_chr7_100096643_100114039	0/0	g0037	2	0	0	2	0	0	AP4M1	chr7	100096643	100114039
AP4M1_chr7_100096643_100114039	0/0	g0038	2	2	0	0	0	0	AP4M1	chr7	100096643	100114039
AP4M1_chr7_100096643_100114039	0/0	g0039	1	0	0	1	0	0	AP4M1	chr7	100096643	100114039
AP4M1_chr7_100096643_100114039	0/0	g0040	1	0	0	1	0	0	AP4M1	chr7	100096643	100114039
AP4M1_chr7_100096643_100114039	0/0	g0041	1	0	0	1	0	0	AP4M1	chr7	100096643	100114039
AP4M1_chr7_100096643_100114039	0/0	g0042	1	0	0	0	0	1	AP4M1	chr7	100096643	100114039
AP4M1_chr7_100096643_100114039	0/0	g0043	1	0	1	0	0	0	AP4M1	chr7	100096643	100114039
AP4M1_chr7_100096643_100114039	0/0	g0044	1	0	0	1	0	0	AP4M1	chr7	100096643	100114039
AP4M1_chr7_100096643_100114039	0/0	g0045	1	0	0	1	0	0	AP4M1	chr7	100096643	100114039
AP4M1_chr7_100096643_100114039	0/0	g0046	1	0	0	1	0	0	AP4M1	chr7	100096643	100114039
AP4M1_chr7_100096643_100114039	0/0	g0047	1	0	1	0	0	0	AP4M1	chr7	100096643	100114039
AP4M1_chr7_100096643_100114039	0/0	g0048	1	0	0	1	0	0	AP4M1	chr7	100096643	100114039
AP4M1_chr7_100096643_100114039	0/0	g0049	1	0	1	0	0	0	AP4M1	chr7	100096643	100114039