JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
APLF_chr2_68462585_68585162	0/0	g0134	1	1	0	0	0	0	APLF	chr2	68462585	68585162
APLF_chr2_68462585_68585162	0/0	g0135	1	0	0	0	1	0	APLF	chr2	68462585	68585162
APLF_chr2_68462585_68585162	0/0	g0136	1	1	0	0	0	0	APLF	chr2	68462585	68585162
APLF_chr2_68462585_68585162	0/0	g0137	1	1	0	0	0	0	APLF	chr2	68462585	68585162
APLF_chr2_68462585_68585162	0/0	g0138	1	1	0	0	0	0	APLF	chr2	68462585	68585162
APLF_chr2_68462585_68585162	0/0	g0139	1	1	0	0	0	0	APLF	chr2	68462585	68585162
APLF_chr2_68462585_68585162	0/0	g0140	1	1	0	0	0	0	APLF	chr2	68462585	68585162
APLF_chr2_68462585_68585162	0/0	g0141	1	1	0	0	0	0	APLF	chr2	68462585	68585162
APLF_chr2_68462585_68585162	0/0	g0142	1	0	1	0	0	0	APLF	chr2	68462585	68585162
APLF_chr2_68462585_68585162	0/0	g0143	1	0	0	0	0	1	APLF	chr2	68462585	68585162
APLF_chr2_68462585_68585162	0/0	g0144	1	0	0	0	0	1	APLF	chr2	68462585	68585162
APLF_chr2_68462585_68585162	0/0	g0145	1	1	0	0	0	0	APLF	chr2	68462585	68585162
APLF_chr2_68462585_68585162	0/0	g0146	1	1	0	0	0	0	APLF	chr2	68462585	68585162
APLF_chr2_68462585_68585162	0/0	g0147	1	0	0	0	0	1	APLF	chr2	68462585	68585162
APLF_chr2_68462585_68585162	0/0	g0148	1	0	0	1	0	0	APLF	chr2	68462585	68585162
APLF_chr2_68462585_68585162	0/0	g0149	1	0	1	0	0	0	APLF	chr2	68462585	68585162
APLF_chr2_68462585_68585162	0/0	g0150	1	0	1	0	0	0	APLF	chr2	68462585	68585162
APLF_chr2_68462585_68585162	0/0	g0151	1	1	0	0	0	0	APLF	chr2	68462585	68585162
APLF_chr2_68462585_68585162	1/0	g0152	1	0	0	0	0	0	APLF	chr2	68462585	68585162
APLF_chr2_68462585_68585162	0/0	g0153	1	0	0	0	0	1	APLF	chr2	68462585	68585162
APLF_chr2_68462585_68585162	0/0	g0154	1	0	1	0	0	0	APLF	chr2	68462585	68585162
APLF_chr2_68462585_68585162	0/0	g0155	1	0	0	1	0	0	APLF	chr2	68462585	68585162
APLF_chr2_68462585_68585162	0/0	g0156	1	0	0	1	0	0	APLF	chr2	68462585	68585162
APLF_chr2_68462585_68585162	0/0	g0157	1	0	0	0	1	0	APLF	chr2	68462585	68585162
APLF_chr2_68462585_68585162	0/0	g0158	1	1	0	0	0	0	APLF	chr2	68462585	68585162
APLF_chr2_68462585_68585162	0/0	g0159	1	0	0	1	0	0	APLF	chr2	68462585	68585162
APLF_chr2_68462585_68585162	0/0	g0160	1	0	0	1	0	0	APLF	chr2	68462585	68585162
APLF_chr2_68462585_68585162	0/0	g0161	1	1	0	0	0	0	APLF	chr2	68462585	68585162
APLF_chr2_68462585_68585162	0/0	g0162	1	1	0	0	0	0	APLF	chr2	68462585	68585162
APLF_chr2_68462585_68585162	0/0	g0163	1	1	0	0	0	0	APLF	chr2	68462585	68585162
APLF_chr2_68462585_68585162	0/0	g0164	1	1	0	0	0	0	APLF	chr2	68462585	68585162
APLF_chr2_68462585_68585162	0/0	g0165	1	1	0	0	0	0	APLF	chr2	68462585	68585162
APLF_chr2_68462585_68585162	0/0	g0166	1	1	0	0	0	0	APLF	chr2	68462585	68585162
APLF_chr2_68462585_68585162	0/0	g0167	1	1	0	0	0	0	APLF	chr2	68462585	68585162
APLF_chr2_68462585_68585162	0/0	g0168	1	1	0	0	0	0	APLF	chr2	68462585	68585162
APLF_chr2_68462585_68585162	0/0	g0169	1	1	0	0	0	0	APLF	chr2	68462585	68585162
APLNR_chr11_57228591_57242250	1/1	g0000	430	98	78	190	16	46	APLNR	chr11	57228591	57242250
APLN_chrX_129640259_129659956	1/1	g0001	75	8	25	21	5	14	APLN	chrX	129640259	129659956
APLN_chrX_129640259_129659956	0/0	g0002	62	10	2	46	0	4	APLN	chrX	129640259	129659956
APLN_chrX_129640259_129659956	0/0	g0003	31	9	4	15	0	3	APLN	chrX	129640259	129659956
APLN_chrX_129640259_129659956	0/0	g0004	17	0	0	17	0	0	APLN	chrX	129640259	129659956
APLN_chrX_129640259_129659956	0/0	g0005	16	16	0	0	0	0	APLN	chrX	129640259	129659956
APLN_chrX_129640259_129659956	0/0	g0006	14	0	0	13	0	1	APLN	chrX	129640259	129659956
APLN_chrX_129640259_129659956	0/0	g0007	12	0	4	0	6	2	APLN	chrX	129640259	129659956
APLN_chrX_129640259_129659956	0/0	g0008	6	0	0	6	0	0	APLN	chrX	129640259	129659956
APLN_chrX_129640259_129659956	0/0	g0009	5	3	2	0	0	0	APLN	chrX	129640259	129659956
APLN_chrX_129640259_129659956	0/0	g0010	4	4	0	0	0	0	APLN	chrX	129640259	129659956
APLN_chrX_129640259_129659956	0/0	g0011	3	3	0	0	0	0	APLN	chrX	129640259	129659956
APLN_chrX_129640259_129659956	0/0	g0012	3	3	0	0	0	0	APLN	chrX	129640259	129659956
APLN_chrX_129640259_129659956	0/0	g0013	3	3	0	0	0	0	APLN	chrX	129640259	129659956