JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ABHD12_chr20_25295214_25395835	0/0	g0285	1	1	0	0	0	0	ABHD12	chr20	25295214	25395835
ABHD12_chr20_25295214_25395835	0/0	g0286	1	1	0	0	0	0	ABHD12	chr20	25295214	25395835
ABHD12_chr20_25295214_25395835	0/0	g0287	1	1	0	0	0	0	ABHD12	chr20	25295214	25395835
ABHD12_chr20_25295214_25395835	0/0	g0288	1	1	0	0	0	0	ABHD12	chr20	25295214	25395835
ABHD12_chr20_25295214_25395835	0/0	g0289	1	1	0	0	0	0	ABHD12	chr20	25295214	25395835
ABHD12_chr20_25295214_25395835	0/0	g0290	1	0	0	0	1	0	ABHD12	chr20	25295214	25395835
ABHD12_chr20_25295214_25395835	0/0	g0291	1	1	0	0	0	0	ABHD12	chr20	25295214	25395835
ABHD12_chr20_25295214_25395835	0/0	g0292	1	1	0	0	0	0	ABHD12	chr20	25295214	25395835
ABHD12_chr20_25295214_25395835	0/0	g0293	1	1	0	0	0	0	ABHD12	chr20	25295214	25395835
ABHD12_chr20_25295214_25395835	0/0	g0294	1	0	1	0	0	0	ABHD12	chr20	25295214	25395835
ABHD12_chr20_25295214_25395835	0/0	g0295	1	1	0	0	0	0	ABHD12	chr20	25295214	25395835
ABHD12_chr20_25295214_25395835	0/0	g0296	1	1	0	0	0	0	ABHD12	chr20	25295214	25395835
ABHD12_chr20_25295214_25395835	0/0	g0297	1	1	0	0	0	0	ABHD12	chr20	25295214	25395835
ABHD12_chr20_25295214_25395835	0/0	g0298	1	1	0	0	0	0	ABHD12	chr20	25295214	25395835
ABHD12_chr20_25295214_25395835	0/0	g0299	1	1	0	0	0	0	ABHD12	chr20	25295214	25395835
ABHD12_chr20_25295214_25395835	0/0	g0300	1	0	1	0	0	0	ABHD12	chr20	25295214	25395835
ABHD12_chr20_25295214_25395835	0/0	g0301	1	1	0	0	0	0	ABHD12	chr20	25295214	25395835
ABHD12_chr20_25295214_25395835	0/0	g0302	1	1	0	0	0	0	ABHD12	chr20	25295214	25395835
ABHD12_chr20_25295214_25395835	0/0	g0303	1	1	0	0	0	0	ABHD12	chr20	25295214	25395835
ABHD12_chr20_25295214_25395835	0/0	g0304	1	1	0	0	0	0	ABHD12	chr20	25295214	25395835
ABHD12_chr20_25295214_25395835	0/0	g0305	1	1	0	0	0	0	ABHD12	chr20	25295214	25395835
ABHD12_chr20_25295214_25395835	0/0	g0306	1	1	0	0	0	0	ABHD12	chr20	25295214	25395835
ABHD12_chr20_25295214_25395835	0/0	g0307	1	1	0	0	0	0	ABHD12	chr20	25295214	25395835
ABHD12_chr20_25295214_25395835	0/0	g0308	1	1	0	0	0	0	ABHD12	chr20	25295214	25395835
ABHD12_chr20_25295214_25395835	0/0	g0309	1	0	1	0	0	0	ABHD12	chr20	25295214	25395835
ABHD12_chr20_25295214_25395835	0/0	g0310	1	1	0	0	0	0	ABHD12	chr20	25295214	25395835
ABHD12_chr20_25295214_25395835	0/0	g0311	1	1	0	0	0	0	ABHD12	chr20	25295214	25395835
ABHD12_chr20_25295214_25395835	0/0	g0312	1	1	0	0	0	0	ABHD12	chr20	25295214	25395835
ABHD12_chr20_25295214_25395835	0/0	g0313	1	1	0	0	0	0	ABHD12	chr20	25295214	25395835
ABHD12_chr20_25295214_25395835	0/0	g0314	1	1	0	0	0	0	ABHD12	chr20	25295214	25395835
ABHD12_chr20_25295214_25395835	0/0	g0315	1	1	0	0	0	0	ABHD12	chr20	25295214	25395835
ABHD13_chr13_108213392_108239243	0/1	g0001	68	0	12	42	4	9	ABHD13	chr13	108213392	108239243
ABHD13_chr13_108213392_108239243	0/0	g0002	32	4	5	19	2	2	ABHD13	chr13	108213392	108239243
ABHD13_chr13_108213392_108239243	0/0	g0003	30	0	12	18	0	0	ABHD13	chr13	108213392	108239243
ABHD13_chr13_108213392_108239243	1/0	g0004	26	9	2	10	0	4	ABHD13	chr13	108213392	108239243
ABHD13_chr13_108213392_108239243	0/0	g0005	23	6	8	0	3	6	ABHD13	chr13	108213392	108239243
ABHD13_chr13_108213392_108239243	0/0	g0006	18	4	7	6	0	1	ABHD13	chr13	108213392	108239243
ABHD13_chr13_108213392_108239243	0/0	g0007	17	7	5	4	1	0	ABHD13	chr13	108213392	108239243
ABHD13_chr13_108213392_108239243	0/0	g0008	13	2	11	0	0	0	ABHD13	chr13	108213392	108239243
ABHD13_chr13_108213392_108239243	0/0	g0009	13	0	0	13	0	0	ABHD13	chr13	108213392	108239243
ABHD13_chr13_108213392_108239243	0/0	g0010	12	12	0	0	0	0	ABHD13	chr13	108213392	108239243
ABHD13_chr13_108213392_108239243	0/0	g0011	8	0	0	8	0	0	ABHD13	chr13	108213392	108239243
ABHD13_chr13_108213392_108239243	0/0	g0012	8	7	1	0	0	0	ABHD13	chr13	108213392	108239243
ABHD13_chr13_108213392_108239243	0/0	g0013	6	6	0	0	0	0	ABHD13	chr13	108213392	108239243
ABHD13_chr13_108213392_108239243	0/0	g0014	6	5	1	0	0	0	ABHD13	chr13	108213392	108239243
ABHD13_chr13_108213392_108239243	0/0	g0015	6	0	0	6	0	0	ABHD13	chr13	108213392	108239243
ABHD13_chr13_108213392_108239243	0/0	g0016	5	0	0	5	0	0	ABHD13	chr13	108213392	108239243
ABHD13_chr13_108213392_108239243	0/0	g0017	5	0	0	5	0	0	ABHD13	chr13	108213392	108239243
ABHD13_chr13_108213392_108239243	0/0	g0018	4	1	0	0	2	1	ABHD13	chr13	108213392	108239243
ABHD13_chr13_108213392_108239243	0/0	g0019	3	3	0	0	0	0	ABHD13	chr13	108213392	108239243