JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ABHD13_chr13_108213392_108239243	0/0	g0070	1	0	0	1	0	0	ABHD13	chr13	108213392	108239243
ABHD13_chr13_108213392_108239243	0/0	g0071	1	1	0	0	0	0	ABHD13	chr13	108213392	108239243
ABHD13_chr13_108213392_108239243	0/0	g0072	1	0	1	0	0	0	ABHD13	chr13	108213392	108239243
ABHD13_chr13_108213392_108239243	0/0	g0073	1	0	0	0	0	1	ABHD13	chr13	108213392	108239243
ABHD13_chr13_108213392_108239243	0/0	g0074	1	0	0	0	0	1	ABHD13	chr13	108213392	108239243
ABHD13_chr13_108213392_108239243	0/0	g0075	1	1	0	0	0	0	ABHD13	chr13	108213392	108239243
ABHD13_chr13_108213392_108239243	0/0	g0076	1	0	1	0	0	0	ABHD13	chr13	108213392	108239243
ABHD13_chr13_108213392_108239243	0/0	g0077	1	1	0	0	0	0	ABHD13	chr13	108213392	108239243
ABHD13_chr13_108213392_108239243	0/0	g0078	1	1	0	0	0	0	ABHD13	chr13	108213392	108239243
ABHD13_chr13_108213392_108239243	0/0	g0079	1	0	0	1	0	0	ABHD13	chr13	108213392	108239243
ABHD13_chr13_108213392_108239243	0/0	g0080	1	0	0	1	0	0	ABHD13	chr13	108213392	108239243
ABHD13_chr13_108213392_108239243	0/0	g0081	1	1	0	0	0	0	ABHD13	chr13	108213392	108239243
ABHD13_chr13_108213392_108239243	0/0	g0082	1	0	0	1	0	0	ABHD13	chr13	108213392	108239243
ABHD13_chr13_108213392_108239243	0/0	g0083	1	0	0	1	0	0	ABHD13	chr13	108213392	108239243
ABHD13_chr13_108213392_108239243	0/0	g0084	1	0	0	1	0	0	ABHD13	chr13	108213392	108239243
ABHD13_chr13_108213392_108239243	0/0	g0085	1	0	0	1	0	0	ABHD13	chr13	108213392	108239243
ABHD13_chr13_108213392_108239243	0/0	g0086	1	0	0	1	0	0	ABHD13	chr13	108213392	108239243
ABHD13_chr13_108213392_108239243	0/0	g0087	1	1	0	0	0	0	ABHD13	chr13	108213392	108239243
ABHD13_chr13_108213392_108239243	0/0	g0088	1	0	0	1	0	0	ABHD13	chr13	108213392	108239243
ABHD13_chr13_108213392_108239243	0/0	g0089	1	0	1	0	0	0	ABHD13	chr13	108213392	108239243
ABHD13_chr13_108213392_108239243	0/0	g0090	1	0	0	0	0	1	ABHD13	chr13	108213392	108239243
ABHD13_chr13_108213392_108239243	0/0	g0091	1	1	0	0	0	0	ABHD13	chr13	108213392	108239243
ABHD13_chr13_108213392_108239243	0/0	g0092	1	0	1	0	0	0	ABHD13	chr13	108213392	108239243
ABHD14A_chr3_51970064_51986196	1/0	g0001	171	41	28	73	6	22	ABHD14A	chr3	51970064	51986196
ABHD14A_chr3_51970064_51986196	0/1	g0002	74	2	15	41	4	11	ABHD14A	chr3	51970064	51986196
ABHD14A_chr3_51970064_51986196	0/0	g0003	13	0	1	11	0	1	ABHD14A	chr3	51970064	51986196
ABHD14A_chr3_51970064_51986196	0/0	g0004	10	6	4	0	0	0	ABHD14A	chr3	51970064	51986196
ABHD14A_chr3_51970064_51986196	0/0	g0005	9	8	1	0	0	0	ABHD14A	chr3	51970064	51986196
ABHD14A_chr3_51970064_51986196	0/0	g0006	7	7	0	0	0	0	ABHD14A	chr3	51970064	51986196
ABHD14A_chr3_51970064_51986196	0/0	g0007	6	6	0	0	0	0	ABHD14A	chr3	51970064	51986196
ABHD14A_chr3_51970064_51986196	0/0	g0008	5	0	1	1	0	3	ABHD14A	chr3	51970064	51986196
ABHD14A_chr3_51970064_51986196	0/0	g0009	5	5	0	0	0	0	ABHD14A	chr3	51970064	51986196
ABHD14A_chr3_51970064_51986196	0/0	g0010	5	0	0	4	0	1	ABHD14A	chr3	51970064	51986196
ABHD14A_chr3_51970064_51986196	0/0	g0011	3	0	0	0	3	0	ABHD14A	chr3	51970064	51986196
ABHD14A_chr3_51970064_51986196	0/0	g0012	3	2	1	0	0	0	ABHD14A	chr3	51970064	51986196
ABHD14A_chr3_51970064_51986196	0/0	g0013	3	0	1	2	0	0	ABHD14A	chr3	51970064	51986196
ABHD14A_chr3_51970064_51986196	0/0	g0014	3	3	0	0	0	0	ABHD14A	chr3	51970064	51986196
ABHD14A_chr3_51970064_51986196	0/0	g0015	2	0	0	0	0	2	ABHD14A	chr3	51970064	51986196
ABHD14A_chr3_51970064_51986196	0/0	g0016	2	0	0	2	0	0	ABHD14A	chr3	51970064	51986196
ABHD14A_chr3_51970064_51986196	0/0	g0017	2	2	0	0	0	0	ABHD14A	chr3	51970064	51986196
ABHD14A_chr3_51970064_51986196	0/0	g0018	1	0	1	0	0	0	ABHD14A	chr3	51970064	51986196
ABHD14A_chr3_51970064_51986196	0/0	g0019	1	0	1	0	0	0	ABHD14A	chr3	51970064	51986196
ABHD14A_chr3_51970064_51986196	0/0	g0020	1	1	0	0	0	0	ABHD14A	chr3	51970064	51986196
ABHD14A_chr3_51970064_51986196	0/0	g0021	1	0	0	1	0	0	ABHD14A	chr3	51970064	51986196
ABHD14A_chr3_51970064_51986196	0/0	g0022	1	0	0	1	0	0	ABHD14A	chr3	51970064	51986196
ABHD14A_chr3_51970064_51986196	0/0	g0023	1	0	0	0	0	1	ABHD14A	chr3	51970064	51986196
ABHD14A_chr3_51970064_51986196	0/0	g0024	1	0	0	1	0	0	ABHD14A	chr3	51970064	51986196
ABHD14A_chr3_51970064_51986196	0/0	g0025	1	0	1	0	0	0	ABHD14A	chr3	51970064	51986196
ABHD14A_chr3_51970064_51986196	0/0	g0026	1	0	0	1	0	0	ABHD14A	chr3	51970064	51986196
ABHD14A_chr3_51970064_51986196	0/0	g0027	1	0	0	0	0	1	ABHD14A	chr3	51970064	51986196