JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
APOC3_chr11_116824907_116838072	0/0	g0005	18	2	4	9	0	3	APOC3	chr11	116824907	116838072
APOC3_chr11_116824907_116838072	0/0	g0006	15	4	4	3	1	3	APOC3	chr11	116824907	116838072
APOC3_chr11_116824907_116838072	0/0	g0007	14	5	3	6	0	0	APOC3	chr11	116824907	116838072
APOC3_chr11_116824907_116838072	0/0	g0008	14	0	2	7	0	5	APOC3	chr11	116824907	116838072
APOC3_chr11_116824907_116838072	0/1	g0009	12	0	2	8	0	1	APOC3	chr11	116824907	116838072
APOC3_chr11_116824907_116838072	0/0	g0010	11	0	0	11	0	0	APOC3	chr11	116824907	116838072
APOC3_chr11_116824907_116838072	0/0	g0011	10	0	1	9	0	0	APOC3	chr11	116824907	116838072
APOC3_chr11_116824907_116838072	0/0	g0012	10	2	0	6	1	1	APOC3	chr11	116824907	116838072
APOC3_chr11_116824907_116838072	0/0	g0013	9	0	0	8	0	1	APOC3	chr11	116824907	116838072
APOC3_chr11_116824907_116838072	0/0	g0014	6	0	1	4	0	1	APOC3	chr11	116824907	116838072
APOC3_chr11_116824907_116838072	0/0	g0015	6	4	0	2	0	0	APOC3	chr11	116824907	116838072
APOC3_chr11_116824907_116838072	0/0	g0016	6	3	1	2	0	0	APOC3	chr11	116824907	116838072
APOC3_chr11_116824907_116838072	0/0	g0017	6	0	2	4	0	0	APOC3	chr11	116824907	116838072
APOC3_chr11_116824907_116838072	0/0	g0018	6	0	0	6	0	0	APOC3	chr11	116824907	116838072
APOC3_chr11_116824907_116838072	0/0	g0019	6	0	2	2	0	2	APOC3	chr11	116824907	116838072
APOC3_chr11_116824907_116838072	0/0	g0020	6	0	3	0	3	0	APOC3	chr11	116824907	116838072
APOC3_chr11_116824907_116838072	0/0	g0021	5	4	1	0	0	0	APOC3	chr11	116824907	116838072
APOC3_chr11_116824907_116838072	0/0	g0022	5	1	0	4	0	0	APOC3	chr11	116824907	116838072
APOC3_chr11_116824907_116838072	0/0	g0023	5	0	0	5	0	0	APOC3	chr11	116824907	116838072
APOC3_chr11_116824907_116838072	0/0	g0024	4	4	0	0	0	0	APOC3	chr11	116824907	116838072
APOC3_chr11_116824907_116838072	0/0	g0025	4	3	0	1	0	0	APOC3	chr11	116824907	116838072
APOC3_chr11_116824907_116838072	0/0	g0026	4	0	1	2	1	0	APOC3	chr11	116824907	116838072
APOC3_chr11_116824907_116838072	0/0	g0027	3	0	2	0	0	1	APOC3	chr11	116824907	116838072
APOC3_chr11_116824907_116838072	0/0	g0028	3	0	2	0	1	0	APOC3	chr11	116824907	116838072
APOC3_chr11_116824907_116838072	0/0	g0029	3	0	2	0	1	0	APOC3	chr11	116824907	116838072
APOC3_chr11_116824907_116838072	0/0	g0030	3	0	0	0	0	3	APOC3	chr11	116824907	116838072
APOC3_chr11_116824907_116838072	0/0	g0031	3	3	0	0	0	0	APOC3	chr11	116824907	116838072
APOC3_chr11_116824907_116838072	0/0	g0032	3	3	0	0	0	0	APOC3	chr11	116824907	116838072
APOC3_chr11_116824907_116838072	0/0	g0033	3	1	2	0	0	0	APOC3	chr11	116824907	116838072
APOC3_chr11_116824907_116838072	0/0	g0034	3	3	0	0	0	0	APOC3	chr11	116824907	116838072
APOC3_chr11_116824907_116838072	0/0	g0035	3	0	0	3	0	0	APOC3	chr11	116824907	116838072
APOC3_chr11_116824907_116838072	0/0	g0036	3	0	2	1	0	0	APOC3	chr11	116824907	116838072
APOC3_chr11_116824907_116838072	0/0	g0037	3	0	2	1	0	0	APOC3	chr11	116824907	116838072
APOC3_chr11_116824907_116838072	0/0	g0038	3	0	0	3	0	0	APOC3	chr11	116824907	116838072
APOC3_chr11_116824907_116838072	0/0	g0039	3	0	0	3	0	0	APOC3	chr11	116824907	116838072
APOC3_chr11_116824907_116838072	0/0	g0040	3	0	0	2	0	1	APOC3	chr11	116824907	116838072
APOC3_chr11_116824907_116838072	0/0	g0041	3	0	0	3	0	0	APOC3	chr11	116824907	116838072
APOC3_chr11_116824907_116838072	0/0	g0042	3	0	0	3	0	0	APOC3	chr11	116824907	116838072
APOC3_chr11_116824907_116838072	0/0	g0043	3	0	1	1	0	1	APOC3	chr11	116824907	116838072
APOC3_chr11_116824907_116838072	0/0	g0044	2	2	0	0	0	0	APOC3	chr11	116824907	116838072
APOC3_chr11_116824907_116838072	0/0	g0045	2	2	0	0	0	0	APOC3	chr11	116824907	116838072
APOC3_chr11_116824907_116838072	0/0	g0046	2	2	0	0	0	0	APOC3	chr11	116824907	116838072
APOC3_chr11_116824907_116838072	0/0	g0047	2	0	1	0	1	0	APOC3	chr11	116824907	116838072
APOC3_chr11_116824907_116838072	0/0	g0048	2	0	0	0	2	0	APOC3	chr11	116824907	116838072
APOC3_chr11_116824907_116838072	0/0	g0049	2	2	0	0	0	0	APOC3	chr11	116824907	116838072
APOC3_chr11_116824907_116838072	0/0	g0050	2	2	0	0	0	0	APOC3	chr11	116824907	116838072
APOC3_chr11_116824907_116838072	0/0	g0051	2	2	0	0	0	0	APOC3	chr11	116824907	116838072
APOC3_chr11_116824907_116838072	0/0	g0052	2	0	0	2	0	0	APOC3	chr11	116824907	116838072
APOC3_chr11_116824907_116838072	0/0	g0053	2	0	0	2	0	0	APOC3	chr11	116824907	116838072
APOC3_chr11_116824907_116838072	0/0	g0054	2	0	0	1	0	1	APOC3	chr11	116824907	116838072