JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
APOLD1_chr12_12780659_12796466	0/0	g0004	3	0	0	3	0	0	APOLD1	chr12	12780659	12796466
APOLD1_chr12_12780659_12796466	0/0	g0005	1	1	0	0	0	0	APOLD1	chr12	12780659	12796466
APOLD1_chr12_12780659_12796466	0/0	g0006	1	1	0	0	0	0	APOLD1	chr12	12780659	12796466
APOLD1_chr12_12780659_12796466	0/0	g0007	1	0	1	0	0	0	APOLD1	chr12	12780659	12796466
APOLD1_chr12_12780659_12796466	0/0	g0008	1	1	0	0	0	0	APOLD1	chr12	12780659	12796466
APOLD1_chr12_12780659_12796466	0/0	g0009	1	0	0	1	0	0	APOLD1	chr12	12780659	12796466
APOLD1_chr12_12780659_12796466	0/0	g0010	1	0	1	0	0	0	APOLD1	chr12	12780659	12796466
APOM_chr6_31650894_31663210	0/1	g0001	324	58	67	140	15	43	APOM	chr6	31650894	31663210
APOM_chr6_31650894_31663210	0/0	g0002	34	13	5	14	1	1	APOM	chr6	31650894	31663210
APOM_chr6_31650894_31663210	0/0	g0003	22	7	2	12	0	1	APOM	chr6	31650894	31663210
APOM_chr6_31650894_31663210	0/0	g0004	12	9	1	2	0	0	APOM	chr6	31650894	31663210
APOM_chr6_31650894_31663210	0/0	g0005	7	2	3	0	2	0	APOM	chr6	31650894	31663210
APOM_chr6_31650894_31663210	0/0	g0006	4	0	0	1	0	3	APOM	chr6	31650894	31663210
APOM_chr6_31650894_31663210	0/0	g0007	4	0	0	4	0	0	APOM	chr6	31650894	31663210
APOM_chr6_31650894_31663210	0/0	g0008	3	0	1	2	0	0	APOM	chr6	31650894	31663210
APOM_chr6_31650894_31663210	0/0	g0009	3	0	1	2	0	0	APOM	chr6	31650894	31663210
APOM_chr6_31650894_31663210	0/0	g0010	2	0	0	2	0	0	APOM	chr6	31650894	31663210
APOM_chr6_31650894_31663210	0/0	g0011	1	1	0	0	0	0	APOM	chr6	31650894	31663210
APOM_chr6_31650894_31663210	0/0	g0012	1	0	0	1	0	0	APOM	chr6	31650894	31663210
APOM_chr6_31650894_31663210	0/0	g0013	1	1	0	0	0	0	APOM	chr6	31650894	31663210
APOM_chr6_31650894_31663210	0/0	g0014	1	1	0	0	0	0	APOM	chr6	31650894	31663210
APOOL_chrX_84998877_85098315	0/0	g0001	3	0	0	3	0	0	APOOL	chrX	84998877	85098315
APOOL_chrX_84998877_85098315	0/0	g0002	2	0	0	2	0	0	APOOL	chrX	84998877	85098315
APOOL_chrX_84998877_85098315	0/0	g0003	2	0	2	0	0	0	APOOL	chrX	84998877	85098315
APOOL_chrX_84998877_85098315	0/0	g0004	2	0	2	0	0	0	APOOL	chrX	84998877	85098315
APOOL_chrX_84998877_85098315	0/0	g0005	2	0	1	0	1	0	APOOL	chrX	84998877	85098315
APOOL_chrX_84998877_85098315	0/0	g0006	2	2	0	0	0	0	APOOL	chrX	84998877	85098315
APOOL_chrX_84998877_85098315	0/0	g0007	2	2	0	0	0	0	APOOL	chrX	84998877	85098315
APOOL_chrX_84998877_85098315	0/0	g0008	1	1	0	0	0	0	APOOL	chrX	84998877	85098315
APOOL_chrX_84998877_85098315	0/0	g0009	1	1	0	0	0	0	APOOL	chrX	84998877	85098315
APOOL_chrX_84998877_85098315	0/0	g0010	1	0	0	1	0	0	APOOL	chrX	84998877	85098315
APOOL_chrX_84998877_85098315	0/0	g0011	1	1	0	0	0	0	APOOL	chrX	84998877	85098315
APOOL_chrX_84998877_85098315	0/0	g0012	1	0	1	0	0	0	APOOL	chrX	84998877	85098315
APOOL_chrX_84998877_85098315	0/0	g0013	1	0	1	0	0	0	APOOL	chrX	84998877	85098315
APOOL_chrX_84998877_85098315	0/0	g0014	1	0	0	1	0	0	APOOL	chrX	84998877	85098315
APOOL_chrX_84998877_85098315	0/0	g0015	1	1	0	0	0	0	APOOL	chrX	84998877	85098315
APOOL_chrX_84998877_85098315	0/0	g0016	1	1	0	0	0	0	APOOL	chrX	84998877	85098315
APOOL_chrX_84998877_85098315	0/0	g0017	1	0	1	0	0	0	APOOL	chrX	84998877	85098315
APOOL_chrX_84998877_85098315	0/0	g0018	1	1	0	0	0	0	APOOL	chrX	84998877	85098315
APOOL_chrX_84998877_85098315	0/0	g0019	1	1	0	0	0	0	APOOL	chrX	84998877	85098315
APOOL_chrX_84998877_85098315	0/0	g0020	1	1	0	0	0	0	APOOL	chrX	84998877	85098315
APOOL_chrX_84998877_85098315	0/0	g0021	1	0	0	1	0	0	APOOL	chrX	84998877	85098315
APOOL_chrX_84998877_85098315	0/0	g0022	1	0	0	1	0	0	APOOL	chrX	84998877	85098315
APOOL_chrX_84998877_85098315	0/0	g0023	1	0	1	0	0	0	APOOL	chrX	84998877	85098315
APOOL_chrX_84998877_85098315	0/0	g0024	1	1	0	0	0	0	APOOL	chrX	84998877	85098315
APOOL_chrX_84998877_85098315	0/0	g0025	1	1	0	0	0	0	APOOL	chrX	84998877	85098315
APOOL_chrX_84998877_85098315	0/0	g0026	1	0	0	1	0	0	APOOL	chrX	84998877	85098315
APOOL_chrX_84998877_85098315	0/0	g0027	1	0	0	1	0	0	APOOL	chrX	84998877	85098315
APOOL_chrX_84998877_85098315	0/0	g0028	1	0	0	1	0	0	APOOL	chrX	84998877	85098315
APOOL_chrX_84998877_85098315	0/0	g0029	1	0	0	1	0	0	APOOL	chrX	84998877	85098315