JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ABHD16A_chr6_31681955_31708324	0/0	g0122	1	0	1	0	0	0	ABHD16A	chr6	31681955	31708324
ABHD16A_chr6_31681955_31708324	0/0	g0123	1	0	1	0	0	0	ABHD16A	chr6	31681955	31708324
ABHD16A_chr6_31681955_31708324	0/0	g0124	1	0	1	0	0	0	ABHD16A	chr6	31681955	31708324
ABHD16A_chr6_31681955_31708324	0/0	g0125	1	1	0	0	0	0	ABHD16A	chr6	31681955	31708324
ABHD16A_chr6_31681955_31708324	0/0	g0126	1	0	0	1	0	0	ABHD16A	chr6	31681955	31708324
ABHD16A_chr6_31681955_31708324	0/0	g0127	1	0	0	1	0	0	ABHD16A	chr6	31681955	31708324
ABHD16A_chr6_31681955_31708324	0/0	g0128	1	0	0	1	0	0	ABHD16A	chr6	31681955	31708324
ABHD16A_chr6_31681955_31708324	0/0	g0129	1	0	0	1	0	0	ABHD16A	chr6	31681955	31708324
ABHD16A_chr6_31681955_31708324	0/0	g0130	1	0	0	1	0	0	ABHD16A	chr6	31681955	31708324
ABHD16A_chr6_31681955_31708324	0/0	g0131	1	0	1	0	0	0	ABHD16A	chr6	31681955	31708324
ABHD16A_chr6_31681955_31708324	0/0	g0132	1	1	0	0	0	0	ABHD16A	chr6	31681955	31708324
ABHD16A_chr6_31681955_31708324	0/0	g0133	1	0	0	1	0	0	ABHD16A	chr6	31681955	31708324
ABHD16A_chr6_31681955_31708324	0/0	g0134	1	0	0	0	1	0	ABHD16A	chr6	31681955	31708324
ABHD16A_chr6_31681955_31708324	0/0	g0135	1	1	0	0	0	0	ABHD16A	chr6	31681955	31708324
ABHD16A_chr6_31681955_31708324	0/0	g0136	1	0	0	1	0	0	ABHD16A	chr6	31681955	31708324
ABHD16A_chr6_31681955_31708324	0/0	g0137	1	0	1	0	0	0	ABHD16A	chr6	31681955	31708324
ABHD16A_chr6_31681955_31708324	0/0	g0138	1	0	0	1	0	0	ABHD16A	chr6	31681955	31708324
ABHD16A_chr6_31681955_31708324	0/0	g0139	1	1	0	0	0	0	ABHD16A	chr6	31681955	31708324
ABHD16A_chr6_31681955_31708324	0/0	g0140	1	0	1	0	0	0	ABHD16A	chr6	31681955	31708324
ABHD16A_chr6_31681955_31708324	0/0	g0141	1	0	0	0	1	0	ABHD16A	chr6	31681955	31708324
ABHD16A_chr6_31681955_31708324	0/0	g0142	1	0	0	1	0	0	ABHD16A	chr6	31681955	31708324
ABHD16A_chr6_31681955_31708324	0/0	g0143	1	0	0	1	0	0	ABHD16A	chr6	31681955	31708324
ABHD16A_chr6_31681955_31708324	0/0	g0144	1	1	0	0	0	0	ABHD16A	chr6	31681955	31708324
ABHD16A_chr6_31681955_31708324	0/0	g0145	1	1	0	0	0	0	ABHD16A	chr6	31681955	31708324
ABHD16A_chr6_31681955_31708324	0/0	g0146	1	0	0	1	0	0	ABHD16A	chr6	31681955	31708324
ABHD16A_chr6_31681955_31708324	0/0	g0147	1	0	0	0	0	1	ABHD16A	chr6	31681955	31708324
ABHD16A_chr6_31681955_31708324	0/0	g0148	1	0	0	0	0	1	ABHD16A	chr6	31681955	31708324
ABHD16A_chr6_31681955_31708324	0/0	g0149	1	0	0	1	0	0	ABHD16A	chr6	31681955	31708324
ABHD16A_chr6_31681955_31708324	0/0	g0150	1	0	0	1	0	0	ABHD16A	chr6	31681955	31708324
ABHD16A_chr6_31681955_31708324	0/0	g0151	1	1	0	0	0	0	ABHD16A	chr6	31681955	31708324
ABHD16A_chr6_31681955_31708324	0/0	g0152	1	0	0	1	0	0	ABHD16A	chr6	31681955	31708324
ABHD16A_chr6_31681955_31708324	0/0	g0153	1	0	0	1	0	0	ABHD16A	chr6	31681955	31708324
ABHD16A_chr6_31681955_31708324	0/0	g0154	1	0	0	1	0	0	ABHD16A	chr6	31681955	31708324
ABHD16A_chr6_31681955_31708324	0/0	g0155	1	0	1	0	0	0	ABHD16A	chr6	31681955	31708324
ABHD16A_chr6_31681955_31708324	0/0	g0156	1	0	0	1	0	0	ABHD16A	chr6	31681955	31708324
ABHD16A_chr6_31681955_31708324	0/0	g0157	1	0	0	1	0	0	ABHD16A	chr6	31681955	31708324
ABHD16A_chr6_31681955_31708324	0/0	g0158	1	0	0	1	0	0	ABHD16A	chr6	31681955	31708324
ABHD16A_chr6_31681955_31708324	0/0	g0159	1	0	0	1	0	0	ABHD16A	chr6	31681955	31708324
ABHD16A_chr6_31681955_31708324	0/0	g0160	1	0	0	1	0	0	ABHD16A	chr6	31681955	31708324
ABHD16A_chr6_31681955_31708324	0/0	g0161	1	0	0	1	0	0	ABHD16A	chr6	31681955	31708324
ABHD16A_chr6_31681955_31708324	0/0	g0162	1	1	0	0	0	0	ABHD16A	chr6	31681955	31708324
ABHD16B_chr20_63856498_63867988	1/1	g0000	398	92	80	162	18	44	ABHD16B	chr20	63856498	63867988
ABHD17A_chr19_1871810_1890496	1/1	g0001	92	18	16	49	2	5	ABHD17A	chr19	1871810	1890496
ABHD17A_chr19_1871810_1890496	0/0	g0002	81	9	15	48	2	7	ABHD17A	chr19	1871810	1890496
ABHD17A_chr19_1871810_1890496	0/0	g0003	45	1	7	31	2	4	ABHD17A	chr19	1871810	1890496
ABHD17A_chr19_1871810_1890496	0/0	g0004	33	2	14	1	7	9	ABHD17A	chr19	1871810	1890496
ABHD17A_chr19_1871810_1890496	0/0	g0005	30	9	3	17	0	1	ABHD17A	chr19	1871810	1890496
ABHD17A_chr19_1871810_1890496	0/0	g0006	9	0	3	1	0	5	ABHD17A	chr19	1871810	1890496
ABHD17A_chr19_1871810_1890496	0/0	g0007	6	6	0	0	0	0	ABHD17A	chr19	1871810	1890496
ABHD17A_chr19_1871810_1890496	0/0	g0008	5	5	0	0	0	0	ABHD17A	chr19	1871810	1890496