JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
AQP12B_chr2_240671418_240687885	0/0	g0060	1	0	1	0	0	0	AQP12B	chr2	240671418	240687885
AQP12B_chr2_240671418_240687885	0/0	g0061	1	0	1	0	0	0	AQP12B	chr2	240671418	240687885
AQP12B_chr2_240671418_240687885	0/0	g0062	1	0	0	0	1	0	AQP12B	chr2	240671418	240687885
AQP12B_chr2_240671418_240687885	0/0	g0063	1	0	0	0	0	1	AQP12B	chr2	240671418	240687885
AQP12B_chr2_240671418_240687885	0/0	g0064	1	1	0	0	0	0	AQP12B	chr2	240671418	240687885
AQP12B_chr2_240671418_240687885	0/0	g0065	1	1	0	0	0	0	AQP12B	chr2	240671418	240687885
AQP12B_chr2_240671418_240687885	0/0	g0066	1	0	0	0	1	0	AQP12B	chr2	240671418	240687885
AQP12B_chr2_240671418_240687885	0/0	g0067	1	1	0	0	0	0	AQP12B	chr2	240671418	240687885
AQP12B_chr2_240671418_240687885	0/0	g0068	1	1	0	0	0	0	AQP12B	chr2	240671418	240687885
AQP12B_chr2_240671418_240687885	0/0	g0069	1	1	0	0	0	0	AQP12B	chr2	240671418	240687885
AQP12B_chr2_240671418_240687885	0/0	g0070	1	0	0	1	0	0	AQP12B	chr2	240671418	240687885
AQP12B_chr2_240671418_240687885	0/0	g0071	1	0	0	0	0	1	AQP12B	chr2	240671418	240687885
AQP12B_chr2_240671418_240687885	0/0	g0072	1	0	1	0	0	0	AQP12B	chr2	240671418	240687885
AQP12B_chr2_240671418_240687885	0/0	g0073	1	1	0	0	0	0	AQP12B	chr2	240671418	240687885
AQP12B_chr2_240671418_240687885	0/0	g0074	1	0	0	0	0	1	AQP12B	chr2	240671418	240687885
AQP12B_chr2_240671418_240687885	0/0	g0075	1	1	0	0	0	0	AQP12B	chr2	240671418	240687885
AQP12B_chr2_240671418_240687885	0/0	g0076	1	1	0	0	0	0	AQP12B	chr2	240671418	240687885
AQP1_chr7_30906853_30930516	1/0	g0001	38	1	10	20	0	6	AQP1	chr7	30906853	30930516
AQP1_chr7_30906853_30930516	0/0	g0002	30	1	4	25	0	0	AQP1	chr7	30906853	30930516
AQP1_chr7_30906853_30930516	0/0	g0003	10	0	4	6	0	0	AQP1	chr7	30906853	30930516
AQP1_chr7_30906853_30930516	0/0	g0004	10	0	0	10	0	0	AQP1	chr7	30906853	30930516
AQP1_chr7_30906853_30930516	0/0	g0005	10	1	6	0	0	3	AQP1	chr7	30906853	30930516
AQP1_chr7_30906853_30930516	0/0	g0006	9	2	4	0	3	0	AQP1	chr7	30906853	30930516
AQP1_chr7_30906853_30930516	0/0	g0007	7	0	0	7	0	0	AQP1	chr7	30906853	30930516
AQP1_chr7_30906853_30930516	0/0	g0008	7	0	0	7	0	0	AQP1	chr7	30906853	30930516
AQP1_chr7_30906853_30930516	0/0	g0009	7	5	1	1	0	0	AQP1	chr7	30906853	30930516
AQP1_chr7_30906853_30930516	0/0	g0010	6	0	3	2	1	0	AQP1	chr7	30906853	30930516
AQP1_chr7_30906853_30930516	0/0	g0011	6	6	0	0	0	0	AQP1	chr7	30906853	30930516
AQP1_chr7_30906853_30930516	0/0	g0012	6	0	0	3	0	3	AQP1	chr7	30906853	30930516
AQP1_chr7_30906853_30930516	0/0	g0013	5	0	0	5	0	0	AQP1	chr7	30906853	30930516
AQP1_chr7_30906853_30930516	0/0	g0014	5	0	0	5	0	0	AQP1	chr7	30906853	30930516
AQP1_chr7_30906853_30930516	0/0	g0015	5	5	0	0	0	0	AQP1	chr7	30906853	30930516
AQP1_chr7_30906853_30930516	0/0	g0016	4	0	0	4	0	0	AQP1	chr7	30906853	30930516
AQP1_chr7_30906853_30930516	0/0	g0017	4	0	3	1	0	0	AQP1	chr7	30906853	30930516
AQP1_chr7_30906853_30930516	0/0	g0018	4	0	1	2	0	1	AQP1	chr7	30906853	30930516
AQP1_chr7_30906853_30930516	0/0	g0019	4	0	0	4	0	0	AQP1	chr7	30906853	30930516
AQP1_chr7_30906853_30930516	0/0	g0020	4	0	0	2	0	2	AQP1	chr7	30906853	30930516
AQP1_chr7_30906853_30930516	0/0	g0021	4	0	3	0	0	1	AQP1	chr7	30906853	30930516
AQP1_chr7_30906853_30930516	0/0	g0022	4	0	4	0	0	0	AQP1	chr7	30906853	30930516
AQP1_chr7_30906853_30930516	0/0	g0023	4	0	0	4	0	0	AQP1	chr7	30906853	30930516
AQP1_chr7_30906853_30930516	0/0	g0024	4	0	0	4	0	0	AQP1	chr7	30906853	30930516
AQP1_chr7_30906853_30930516	0/0	g0025	4	0	0	0	0	4	AQP1	chr7	30906853	30930516
AQP1_chr7_30906853_30930516	0/0	g0026	4	0	0	3	0	1	AQP1	chr7	30906853	30930516
AQP1_chr7_30906853_30930516	0/0	g0027	4	0	0	4	0	0	AQP1	chr7	30906853	30930516
AQP1_chr7_30906853_30930516	0/0	g0028	4	4	0	0	0	0	AQP1	chr7	30906853	30930516
AQP1_chr7_30906853_30930516	0/0	g0029	3	0	1	0	1	1	AQP1	chr7	30906853	30930516
AQP1_chr7_30906853_30930516	0/0	g0030	3	0	0	3	0	0	AQP1	chr7	30906853	30930516
AQP1_chr7_30906853_30930516	0/1	g0031	3	0	1	0	1	0	AQP1	chr7	30906853	30930516
AQP1_chr7_30906853_30930516	0/0	g0032	3	0	2	0	0	1	AQP1	chr7	30906853	30930516
AQP1_chr7_30906853_30930516	0/0	g0033	2	2	0	0	0	0	AQP1	chr7	30906853	30930516